RNA–Protein interactions for RNA: ENST00000361781.6

SGMS1-202, Transcript of sphingomyelin synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGMS1, Length 3,744 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-202ENST00000361781 PRLP01236 227 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 C8orf89P0DMQ9 161 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 PRG2P13727 222 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 SPNP16150 400 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 RPS3P23396 243 aaKnown RBP eCLIP13.12□□□□□ -0.31
SGMS1-202ENST00000361781 HOXC13P31276 330 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 GINS1Q14691 196 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 ARSIQ5FYB1 569 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 AGAP6Q5VW22 663 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 PAMR1Q6UXH9 720 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 C17orf64Q86WR6 236 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 IZUMO1Q8IYV9 350 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 TEX26Q8N6G2 289 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 FAM46DQ8NEK8 389 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 AGAP4Q96P64 663 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 CCDC177Q9NQR7 707 aaPredicted RBP13.12□□□□□ -0.31
SGMS1-202ENST00000361781 IMP3Q9NV31 184 aaKnown RBP13.12□□□□□ -0.31
SGMS1-202ENST00000361781 CARD8Q9Y2G2 431 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 TRBV23OR9-2A0A075B6M9 112 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 MANSC4A6NHS7 340 aaPredicted RBP13.12□□□□□ -0.31
SGMS1-202ENST00000361781 ENTPD6O75354 484 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 OAZ2O95190 189 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 ADORA3P0DMS8 318 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 EIF2DP41214 584 aaKnown RBP13.12□□□□□ -0.31
SGMS1-202ENST00000361781 HNMTP50135 292 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 ATP12AP54707 1039 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 KEAP1Q14145 624 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 RGNQ15493 299 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 GTF2IRD2BQ6EKJ0 949 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 C11orf88Q6PI97 169 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 SLC16A12Q6ZSM3 486 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 FGD2Q7Z6J4 655 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 TMCO2Q7Z6W1 182 aaPredicted RBP13.12□□□□□ -0.31
SGMS1-202ENST00000361781 GTF2IRD2Q86UP8 949 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 IQCHQ86VS3 1027 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 AMIGO1Q86WK6 493 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 NEDD4LQ96PU5 975 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 MRPL9Q9BYD2 267 aaKnown RBP13.12□□□□□ -0.31
SGMS1-202ENST00000361781 RACGAP1Q9H0H5 632 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 KCNK12Q9HB15 430 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 FBXW2Q9UKT8 454 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 PPT2Q9UMR5 302 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 ENTPD4Q9Y227 616 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 TRIP12Q14669 1992 aaPredicted RBP13.12□□□□□ -0.31
SGMS1-202ENST00000361781 ALPK2Q86TB3 2170 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.12□□□□□ -0.31
SGMS1-202ENST00000361781 TSPAN4O14817 238 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 OR1F1O43749 312 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 HTR1AP08908 422 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 CENPAP49450 140 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 CRISP1P54107 249 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 IFITM3Q01628 133 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 PCDH1Q08174 1060 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 PRSS36Q5K4E3 855 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 PPP2R2DQ66LE6 453 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 MZT2AQ6P582 158 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 LAX1Q8IWV1 398 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 ELMOD2Q8IZ81 293 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 SLC37A3Q8NCC5 494 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 DYNC2LI1Q8TCX1 351 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 ZDHHC4Q9NPG8 344 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 ING4Q9UNL4 249 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 CMAHPQ9Y471 501 aa13.12□□□□□ -0.31
SGMS1-202ENST00000361781 GREB1LQ9C091 1923 aaPredicted RBP13.12□□□□□ -0.31
SGMS1-202ENST00000361781 A0A1W2PPK0 400 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 DRGXA6NNA5 263 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 I3L521 148 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 ANKRD28O15084 1053 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 SLC16A6O15403 523 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 POP4O95707 220 aaKnown RBP13.11□□□□□ -0.31
SGMS1-202ENST00000361781 CDK1P06493 297 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 CRHR2Q13324 411 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 PIN1Q13526 163 aaPredicted RBP13.11□□□□□ -0.31
SGMS1-202ENST00000361781 SLC35F1Q5T1Q4 408 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 ADNP2Q6IQ32 1131 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 C10orf111Q8N326 155 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 ZNF433Q8N7K0 673 aaPredicted RBP13.11□□□□□ -0.31
SGMS1-202ENST00000361781 PRSS23O95084 383 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 KCNK5O95279 499 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 TSPAN12O95859 305 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 IGLV3-25P01717 112 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 IL3P08700 152 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 AMD1P17707 334 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 NTSP30990 170 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 GGT2P36268 569 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 AP1S2P56377 157 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 DCDC1P59894 354 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 E2F2Q14209 437 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 LRRC26Q2I0M4 334 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 SYT6Q5T7P8 510 aaPredicted RBP13.11□□□□□ -0.31
SGMS1-202ENST00000361781 VRK3Q8IV63 474 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 TMEM80Q96HE8 168 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 LRR1Q96L50 414 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 AKIP1Q9NQ31 210 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 UBR3Q6ZT12 1888 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 MEIOCA2RUB1 952 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 H3BSH0 61 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 UPK1AO00322 258 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 OR5F1O95221 314 aa13.11□□□□□ -0.31
SGMS1-202ENST00000361781 CTSOP43234 321 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms