RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 TMEFF1Q8IYR6 380 aa13.31□□□□□ -0.28
CTR9-201ENST00000361367 SNX33Q8WV41 574 aa13.31□□□□□ -0.28
CTR9-201ENST00000361367 WBP2Q969T9 261 aa13.31□□□□□ -0.28
CTR9-201ENST00000361367 ELSPBP1Q96BH3 223 aa13.31□□□□□ -0.28
CTR9-201ENST00000361367 UBE2ZQ9H832 354 aaPredicted RBP13.31□□□□□ -0.28
CTR9-201ENST00000361367 PAPOLBQ9NRJ5 636 aaKnown RBP13.31□□□□□ -0.28
CTR9-201ENST00000361367 CLEC4EQ9ULY5 219 aa13.31□□□□□ -0.28
CTR9-201ENST00000361367 SIT1Q9Y3P8 196 aa13.31□□□□□ -0.28
CTR9-201ENST00000361367 CPSF4LA6NMK7 179 aaKnown RBP13.3□□□□□ -0.28
CTR9-201ENST00000361367 DIRAS1O95057 198 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 MAGP20916 626 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 CSTF1Q05048 431 aaKnown RBP13.3□□□□□ -0.28
CTR9-201ENST00000361367 SLC5A9Q2M3M2 681 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 PUS10Q3MIT2 529 aaKnown RBP13.3□□□□□ -0.28
CTR9-201ENST00000361367 CYBRD1Q53TN4 286 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 DENND5AQ6IQ26 1287 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 B3GNT6Q6ZMB0 384 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 IL22RA1Q8N6P7 574 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 OR8J3Q8NGG0 315 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 TMBIM1Q969X1 311 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 TIMM29Q9BSF4 260 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 METTL7AQ9H8H3 244 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 PELI2Q9HAT8 420 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 MRPS7Q9Y2R9 242 aaKnown RBP13.3□□□□□ -0.28
CTR9-201ENST00000361367 MYOCOSA0A1B0GUC4 107 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 PDLIM1O00151 329 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 KHNYNO15037 678 aaKnown RBP13.3□□□□□ -0.28
CTR9-201ENST00000361367 KIF1CO43896 1103 aaKnown RBP13.3□□□□□ -0.28
CTR9-201ENST00000361367 TCTE1Q5JU00 501 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 MZT2AQ6P582 158 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 BLOC1S3Q6QNY0 202 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 RABEPKQ7Z6M1 372 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 LRRC25Q8N386 305 aaPredicted RBP13.3□□□□□ -0.28
CTR9-201ENST00000361367 SH3GL3Q99963 347 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 PHF7Q9BWX1 381 aaPredicted RBP13.3□□□□□ -0.28
CTR9-201ENST00000361367 TRIM8Q9BZR9 551 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 RPS17P08708 135 aaKnown RBP13.3□□□□□ -0.28
CTR9-201ENST00000361367 MMP12P39900 470 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 EIF2DP41214 584 aaKnown RBP13.3□□□□□ -0.28
CTR9-201ENST00000361367 POU6F2P78424 691 aaPredicted RBP13.3□□□□□ -0.28
CTR9-201ENST00000361367 SIM1P81133 766 aaPredicted RBP13.3□□□□□ -0.28
CTR9-201ENST00000361367 ST3GAL3Q11203 375 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 SPATS1Q496A3 300 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 METTL2BQ6P1Q9 378 aaKnown RBP13.3□□□□□ -0.28
CTR9-201ENST00000361367 C6orf89Q6UWU4 347 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 GALNT12Q8IXK2 581 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 OR52E4Q8NGH9 312 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 HCAR2Q8TDS4 363 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 NEIL2Q969S2 332 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 CFHR5Q9BXR6 569 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 RP1L1Q8IWN7 2480 aaPredicted RBP13.3□□□□□ -0.28
CTR9-201ENST00000361367 UGDHO60701 494 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 OR5F1O95221 314 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 RPS6KA3P51812 740 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 CTSL3PQ5NE16 218 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 ATG9BQ674R7 924 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 ZC3H14Q6PJT7 736 aaKnown RBP13.3□□□□□ -0.28
CTR9-201ENST00000361367 OR52E1Q8NGJ3 308 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 KCNN2Q9H2S1 579 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 IL21Q9HBE4 155 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 HMG20AQ9NP66 347 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 ACTR10Q9NZ32 417 aa13.3□□□□□ -0.28
CTR9-201ENST00000361367 FGF4P08620 206 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 COX10Q12887 443 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 FADDQ13158 208 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 ARHGAP19Q14CB8 494 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 SGCBQ16585 318 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 RSBN1Q5VWQ0 802 aaPredicted RBP13.29□□□□□ -0.28
CTR9-201ENST00000361367 KIAA0895LQ68EN5 471 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 RBM44Q6ZP01 1051 aaKnown RBP13.29□□□□□ -0.28
CTR9-201ENST00000361367 NUP43Q8NFH3 380 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 DAZLQ92904 295 aaKnown RBP13.29□□□□□ -0.28
CTR9-201ENST00000361367 MSANTD3Q96H12 275 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 SDHAF3Q9NRP4 125 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 CRNNQ9UBG3 495 aaPredicted RBP13.29□□□□□ -0.28
CTR9-201ENST00000361367 MCM3APO60318 1980 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 EMC8O43402 210 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 KIR2DS3Q14952 304 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 CTC1Q2NKJ3 1217 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 CLEC12AQ5QGZ9 265 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 OR4N5Q8IXE1 308 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.29□□□□□ -0.283e-10■■■■□ 22.5
CTR9-201ENST00000361367 ASB11Q8WXH4 323 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 MYADMQ96S97 322 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 HCN2Q9UL51 889 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 WBP11Q9Y2W2 641 aaKnown RBP13.29□□□□□ -0.28
CTR9-201ENST00000361367 IGLV3-27P01718 113 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 OR12D1P0DN82 309 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 HOXC8P31273 242 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.29□□□□□ -0.283e-7■■□□□ 12.5
CTR9-201ENST00000361367 KLHL24Q6TFL4 600 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 LCTLQ6UWM7 567 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 DEFB123Q8N688 67 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 RNF31Q96EP0 1072 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 APIPQ96GX9 242 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 NODALQ96S42 347 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 PELOQ9BRX2 385 aaKnown RBP13.29□□□□□ -0.28
CTR9-201ENST00000361367 OR6C2Q9NZP2 312 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 ADAMTS6Q9UKP5 1117 aa13.29□□□□□ -0.28
CTR9-201ENST00000361367 HTRA2O43464 458 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms