RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 A6NNC1 897 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 AQP7O14520 342 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 SUSD5O60279 629 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 GLSO94925 669 aaPredicted RBP12.86□□□□□ -0.35
VPS29-201ENST00000360579 B3GALT4O96024 378 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 GABRA1P14867 456 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 SLC1A2P43004 574 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 SCTRP47872 440 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 RAB8AP61006 207 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 DHX9Q08211 1270 aaKnown RBP12.86□□□□□ -0.35
VPS29-201ENST00000360579 HYAL2Q12891 473 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 PHKG1Q16816 387 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 C1orf185Q5T7R7 199 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 WLSQ5T9L3 541 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 DUPD1Q68J44 220 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 PAMR1Q6UXH9 720 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 MBOAT1Q6ZNC8 495 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 TRILQ7L0X0 811 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 TAOK1Q7L7X3 1001 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 WDR53Q7Z5U6 358 aaPredicted RBP12.86□□□□□ -0.35
VPS29-201ENST00000360579 CDC20BQ86Y33 519 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 RNF10Q8N5U6 811 aaKnown RBP12.86□□□□□ -0.35
VPS29-201ENST00000360579 FAM222BQ8WU58 562 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 EEF1AKMT1Q8WVE0 214 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 NCLNQ969V3 563 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 ZNF669Q96BR6 464 aaPredicted RBP12.86□□□□□ -0.35
VPS29-201ENST00000360579 PDLIM2Q96JY6 352 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 FAM173AQ9BQD7 235 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 RHBGQ9H310 441 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 IL1RL2Q9HB29 575 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 CRIM1Q9NZV1 1036 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 MYOTQ9UBF9 498 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 CAPN6Q9Y6Q1 641 aa12.86□□□□□ -0.35
VPS29-201ENST00000360579 NSD1Q96L73 2696 aaPredicted RBP12.85□□□□□ -0.35
VPS29-201ENST00000360579 PINLYPA6NC86 204 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 SYT5O00445 386 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 CLDN4O14493 209 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 OR2J2O76002 312 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 ADH7P40394 386 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 MAN2A2P49641 1150 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 GPR143P51810 404 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 NR0B1P51843 470 aaKnown RBP12.85□□□□□ -0.35
VPS29-201ENST00000360579 AP1S2P56377 157 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 HSD17B7P56937 341 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 CSHL1Q14406 222 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 SKOR2Q2VWA4 1001 aaPredicted RBP12.85□□□□□ -0.35
VPS29-201ENST00000360579 FLYWCH1Q4VC44 716 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 RIPPLY2Q5TAB7 128 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 RTL6Q6ICC9 239 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 IL20RBQ6UXL0 311 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 RTL4Q6ZR62 310 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 LIX1LQ8IVB5 337 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 CA13Q8N1Q1 262 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 OR56A3Q8NH54 315 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 MAIP1Q8WWC4 291 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 SLC5A11Q8WWX8 675 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 ATL1Q8WXF7 558 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 C18orf12Q96KH6 178 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 SGCZQ96LD1 299 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 PWWP2AQ96N64 755 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 AARSD1Q9BTE6 412 aaKnown RBP12.85□□□□□ -0.35
VPS29-201ENST00000360579 TRIM54Q9BYV2 358 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 LDAHQ9H6V9 325 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 ADAP2Q9NPF8 381 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 PNO1Q9NRX1 252 aaKnown RBP12.85□□□□□ -0.35
VPS29-201ENST00000360579 ARL15Q9NXU5 204 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 TAS2R13Q9NYV9 303 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 ZNF223Q9UK11 482 aaPredicted RBP12.85□□□□□ -0.35
VPS29-201ENST00000360579 MAD1L1Q9Y6D9 718 aa12.85□□□□□ -0.35
VPS29-201ENST00000360579 DNAJC13O75165 2243 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 ZNF407Q9C0G0 2248 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 TCRBV7S3A2A0A539 114 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 SDR42E2A6NKP2 422 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 HSPB2A8KAH6 182 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 HCN1O60741 890 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 OR6B1O95007 311 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 RAF1P04049 648 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 SMIM10L1P0DMW3 83 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 MLNP12872 115 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 CNR1P21554 472 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 UQCRC1P31930 480 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 HNF4AP41235 474 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 MAGEA5P43359 124 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 MAGEA6P43360 314 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 SLC10A1Q14973 349 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 SIX1Q15475 284 aaPredicted RBP12.84□□□□□ -0.35
VPS29-201ENST00000360579 HSPB2Q16082 182 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 HYAL4Q2M3T9 481 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 DEFB113Q30KQ7 82 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 CATSPEREQ5SY80 951 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 HSDL2Q6YN16 418 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 SCUBE1Q8IWY4 988 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 TMEM132CQ8N3T6 1108 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 TMEM251Q8N6I4 163 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 GOLM1Q8NBJ4 401 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 PYCR2Q96C36 320 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 SMIM10Q96HG1 83 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 FAR2Q96K12 515 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 RASL10BQ96S79 203 aa12.84□□□□□ -0.35
VPS29-201ENST00000360579 AIF1LQ9BQI0 150 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms