RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 SP2Q02086 613 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 FZD3Q9NPG1 666 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 AKR1C4P17516 323 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 LEPRP48357 1165 aaKnown RBP8.99□□□□□ -0.97
VPS13A-203ENST00000360280 KCNC4Q03721 635 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 EN1Q05925 392 aaPredicted RBP8.99□□□□□ -0.97
VPS13A-203ENST00000360280 CMTM1Q8IZ96 169 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 TGM7Q96PF1 710 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 TP63Q9H3D4 680 aaPredicted RBP8.99□□□□□ -0.97
VPS13A-203ENST00000360280 TUBB1Q9H4B7 451 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 CILPO75339 1184 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 ZNF254O75437 659 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 CCNOP22674 350 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 ERN2Q76MJ5 926 aaKnown RBP8.99□□□□□ -0.97
VPS13A-203ENST00000360280 ACTL8Q9H568 366 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 TIGARQ9NQ88 270 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 BOLA2-SMG1P6H3BVE0 249 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 PHYHO14832 338 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 IGFBP4P22692 258 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 TNFSF9P41273 254 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 METTL4Q8N3J2 472 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 TRUB1Q8WWH5 349 aaKnown RBP8.99□□□□□ -0.97
VPS13A-203ENST00000360280 SNAPC3Q92966 411 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 APMAPQ9HDC9 416 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 NAV1Q8NEY1 1877 aa8.99□□□□□ -0.97
VPS13A-203ENST00000360280 CD34P28906 385 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 ASPAP45381 313 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 CARD16Q5EG05 197 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 TMPRSS12Q86WS5 348 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 IL12RB2Q99665 862 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 B4GALT4O60513 344 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 CHRNB1P11230 501 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 KCNJ5P48544 419 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 HNRNPDQ14103 355 aaKnown RBP8.98□□□□□ -0.97
VPS13A-203ENST00000360280 DRICH1Q6PGQ1 229 aaPredicted RBP8.98□□□□□ -0.97
VPS13A-203ENST00000360280 PAPD4Q6PIY7 484 aaKnown RBP8.98□□□□□ -0.97
VPS13A-203ENST00000360280 BEX2Q9BXY8 128 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 BEX1Q9HBH7 125 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 IRS2Q9Y4H2 1338 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 TRAPPC13A5PLN9 417 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 GRM5P41594 1212 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 CNTN2Q02246 1040 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 OR56A3Q8NH54 315 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 TMEM234Q8WY98 164 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 OR51E2Q9H255 320 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 METTL7AQ9H8H3 244 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 AGLP35573 1532 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 RASAL1O95294 804 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 TFP02787 698 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 ENDOUP21128 410 aaKnown RBP8.98□□□□□ -0.97
VPS13A-203ENST00000360280 ADRA1BP35368 520 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 THBS2P35442 1172 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 PPIGQ13427 754 aaKnown RBP eCLIP8.98□□□□□ -0.978e-8■■■□□ 16.5
VPS13A-203ENST00000360280 SLBPQ14493 270 aaKnown RBP eCLIP8.98□□□□□ -0.97
VPS13A-203ENST00000360280 PRAMEF14Q5SWL7 426 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 REEP3Q6NUK4 255 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 ZNF419Q96HQ0 510 aaPredicted RBP8.98□□□□□ -0.97
VPS13A-203ENST00000360280 DNAJC5BQ9UF47 199 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 ATG4BQ9Y4P1 393 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 TARBP1Q13395 1621 aaKnown RBP8.98□□□□□ -0.97
VPS13A-203ENST00000360280 CLEC3AO75596 197 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 PSMD10O75832 226 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 IRF2P14316 349 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 BDKRB2P30411 391 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 CTSOP43234 321 aaPredicted RBP8.98□□□□□ -0.97
VPS13A-203ENST00000360280 CD97P48960 835 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 INAVAQ3KP66 663 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 TMEM220Q6QAJ8 160 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 SVBPQ8N300 66 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 PPIL3Q9H2H8 161 aaKnown RBP8.98□□□□□ -0.97
VPS13A-203ENST00000360280 RLIMQ9NVW2 624 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 KCNIP1Q9NZI2 227 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 PPM1HQ9ULR3 514 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 CLEC4EQ9ULY5 219 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 GP1BBP13224 206 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 OR1D2P34982 312 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 CDK6Q00534 326 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 OR51G2Q8NGK0 314 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 PHOSPHO1Q8TCT1 267 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 HMCESQ96FZ2 354 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 TSSK6Q9BXA6 273 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 POLE4Q9NR33 117 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 MAN2C1Q9NTJ4 1040 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 DKKL1Q9UK85 242 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 ECI2O75521 394 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 CH25HO95992 272 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 NPAS3Q8IXF0 933 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 OR8K5Q8NH50 307 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 TMEM125Q96AQ2 219 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 BTF3L4Q96K17 158 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 RBP7Q96R05 134 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 NR2E3Q9Y5X4 410 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 AKR1C2P52895 323 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 RASGRP3Q8IV61 690 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 SUMF2Q8NBJ7 301 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 PPTC7Q8NI37 304 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 C3orf49Q96BT1 292 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 COQ10AQ96MF6 247 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 SLC32A1Q9H598 525 aa8.98□□□□□ -0.97
VPS13A-203ENST00000360280 ZFP37Q9Y6Q3 630 aaPredicted RBP8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms