RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 QSOX2Q6ZRP7 698 aa6.34□□□□□ -1.39
TRIM38-201ENST00000357085 SKA3Q8IX90 412 aa6.34□□□□□ -1.39
TRIM38-201ENST00000357085 UMODL1-AS1Q8N2C9 162 aa6.34□□□□□ -1.39
TRIM38-201ENST00000357085 DCLRE1CQ96SD1 692 aaKnown RBP6.34□□□□□ -1.39
TRIM38-201ENST00000357085 C12orf57Q99622 126 aa6.34□□□□□ -1.39
TRIM38-201ENST00000357085 VRK1Q99986 396 aaPredicted RBP6.34□□□□□ -1.39
TRIM38-201ENST00000357085 DUSP26Q9BV47 211 aa6.34□□□□□ -1.39
TRIM38-201ENST00000357085 PIGMQ9H3S5 423 aa6.34□□□□□ -1.39
TRIM38-201ENST00000357085 TMPRSS11EQ9UL52 423 aa6.34□□□□□ -1.39
TRIM38-201ENST00000357085 NDRG4Q9ULP0 352 aaKnown RBP6.34□□□□□ -1.39
TRIM38-201ENST00000357085 ALG5Q9Y673 324 aa6.34□□□□□ -1.39
TRIM38-201ENST00000357085 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.34□□□□□ -1.4
TRIM38-201ENST00000357085 ANKRD28O15084 1053 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 UBL3O95164 117 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 ZNF169Q14929 603 aaPredicted RBP6.34□□□□□ -1.4
TRIM38-201ENST00000357085 LARS2Q15031 903 aaKnown RBP6.34□□□□□ -1.4
TRIM38-201ENST00000357085 ZMYND11Q15326 602 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 USP45Q70EL2 814 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 LRCH3Q96II8 777 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 OR4K3Q96R72 315 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 EFCAB11Q9BUY7 163 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 GSX2Q9BZM3 304 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 KLF15Q9UIH9 416 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 SCML1Q9UN30 329 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 A8MUA0 341 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 TOR1AO14656 332 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 ADAM12O43184 909 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 CDRT1O95170 752 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 H1F0P07305 194 aaKnown RBP6.34□□□□□ -1.4
TRIM38-201ENST00000357085 CHMP24386 653 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 ACADLP28330 430 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 WNT4P56705 351 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 CCDC190Q86UF4 302 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 KLHDC8BQ8IXV7 354 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 FBXL6Q8N531 539 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 COQ8AQ8NI60 647 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 TRIM2Q9C040 744 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 SEMA4CQ9C0C4 833 aa6.34□□□□□ -1.4
TRIM38-201ENST00000357085 PRODHO43272 600 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 ARNTP27540 789 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 NNMTP40261 264 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 ISL1P61371 349 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 XKR7Q5GH72 579 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 TRIM46Q7Z4K8 759 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 PRSS42Q7Z5A4 293 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 MON1AQ86VX9 555 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 ARL11Q969Q4 196 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 PPCDCQ96CD2 204 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 SLC41A3Q96GZ6 507 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 DNTTIP1Q9H147 329 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 AMBNQ9NP70 447 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 BTNL2Q9UIR0 455 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 RAF1P04049 648 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 TYMPP19971 482 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 NSG1P42857 185 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 CLDN8P56748 225 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 UFM1P61960 85 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 BRAT1Q6PJG6 821 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 CHST9Q7L1S5 443 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 HJURPQ8NCD3 748 aaPredicted RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 BBS10Q8TAM1 723 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 ZNF516Q92618 1163 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 HGDQ93099 445 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 AARSD1Q9BTE6 412 aaKnown RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 BRF2Q9HAW0 419 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 PLSCR3Q9NRY6 295 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 NLE1Q9NVX2 485 aaPredicted RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 SAGE1Q9NXZ1 904 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 ACSL6Q9UKU0 697 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 LEUTXA8MZ59 168 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 DISC1C4P0D8 188 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 H3BUI4 141 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 MITFO75030 526 aaPredicted RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 CPSF4O95639 269 aaKnown RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 IGSF6O95976 241 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 RPP38P78345 283 aaKnown RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 ZBTB6Q15916 424 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 PRAMEF8Q5VWM4 474 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 KHDRBS2Q5VWX1 349 aaKnown RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 PRAMEF7Q5VXH5 474 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 TCEAL6Q6IPX3 200 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 OR56A1Q8NGH5 318 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 CEP76Q8TAP6 659 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 FRS2Q8WU20 508 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 BTF3L4Q96K17 158 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 NELL2Q99435 816 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 TSNAXQ99598 290 aaKnown RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 DBNDD1Q9H9R9 158 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 CNTRLQ7Z7A1 2325 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 HMX2A2RU54 273 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 NEMP2A6NFY4 417 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 NME6O75414 186 aaPredicted RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 RPL34P49207 117 aaKnown RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 CPZQ66K79 652 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 OR10Z1Q8NGY1 313 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 NXF2Q9GZY0 626 aaKnown RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 SPNS1Q9H2V7 528 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 INTS7Q9NVH2 962 aaKnown RBP6.33□□□□□ -1.4
TRIM38-201ENST00000357085 GPR83Q9NYM4 423 aa6.33□□□□□ -1.4
TRIM38-201ENST00000357085 NLKQ9UBE8 527 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms