RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 ANKDD1BA6NHY2 528 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 WNT9AO14904 365 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 CYP7B1O75881 506 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 OLFM2O95897 454 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 RETP07949 1114 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 GPR1P46091 355 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 NRIP1P48552 1158 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 TGM4P49221 684 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 DUSP7Q16829 419 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 EXOC3L2Q2M3D2 409 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 LRIF1Q5T3J3 769 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 LIPIQ6XZB0 460 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 LRRC70Q7Z2Q7 622 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 DGLUCYQ7Z3D6 616 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 WDR53Q7Z5U6 358 aaPredicted RBP13.21□□□□□ -0.29
EBF3-201ENST00000355311 AMER3Q8N944 861 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 GOLM1Q8NBJ4 401 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 WDR20Q8TBZ3 569 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 S100ZQ8WXG8 99 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 GLYATL1Q969I3 302 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 VMP1Q96GC9 406 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 TXNDC15Q96J42 360 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 CNDP2Q96KP4 475 aaKnown RBP13.21□□□□□ -0.29
EBF3-201ENST00000355311 F2RL3Q96RI0 385 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 CHCHD6Q9BRQ6 235 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 TMEM246Q9BRR3 403 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 COQ3Q9NZJ6 369 aa13.21□□□□□ -0.29
EBF3-201ENST00000355311 TFECO14948 347 aaPredicted RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 UPK1BO75841 260 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 ZNF8P17098 575 aaPredicted RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 IDSP22304 550 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 GRK5P34947 590 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 MPEG1Q2M385 716 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 RBM48Q5RL73 367 aaKnown RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 BRAT1Q6PJG6 821 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 FAM83HQ6ZRV2 1179 aaPredicted RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 GDPD3Q7L5L3 318 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 TSEN54Q7Z6J9 526 aaKnown RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 ENTHD1Q8IYW4 607 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 BTN2A2Q8WVV5 523 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 C11orf16Q9NQ32 467 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 PAQR5Q9NXK6 330 aaPredicted RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 PRELID1Q9Y255 219 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 AGAP14A8MT82 685 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 PRAMEF10O60809 474 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 WBP4O75554 376 aaKnown RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 CXCL10P02778 98 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 CATP04040 527 aaKnown RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 IL3P08700 152 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 CKMT1AP12532 417 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 NPPBP16860 134 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 PPP5CP53041 499 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 POLR2LP62875 67 aaKnown RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 ZNF750Q32MQ0 723 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 LYPLAL1Q5VWZ2 237 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 CNKSR3Q6P9H4 555 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 SHQ1Q6PI26 577 aaKnown RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 METTL4Q8N3J2 472 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 SVOPLQ8N434 492 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 L3MBTL4Q8NA19 623 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 EXOSC8Q96B26 276 aaKnown RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 ZHX1-C8orf76Q96EF9 292 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 LGR4Q9BXB1 951 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 SLC29A3Q9BZD2 475 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 IRF2BPLQ9H1B7 796 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 OR51E2Q9H255 320 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 CUEDC1Q9NWM3 386 aaPredicted RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 SCN3BQ9NY72 215 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 DKK3Q9UBP4 350 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 KCNE2Q9Y6J6 123 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 GRXCR1A8MXD5 290 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 H7BY64 318 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 ICMTO60725 284 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 ATG13O75143 517 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 GABARAPO95166 117 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 HOXB3P14651 431 aaPredicted RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 DNAJA1P31689 397 aaKnown RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 SOX9P48436 509 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 KCNJ10P78508 379 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 NEK10Q6ZWH5 1172 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 NPAS3Q8IXF0 933 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 CBARPQ8N350 705 aaPredicted RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 PRAP1Q96NZ9 151 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 MCCC1Q96RQ3 725 aaPredicted RBP13.2□□□□□ -0.3
EBF3-201ENST00000355311 COPS4Q9BT78 406 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 GIMAP4Q9NUV9 329 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 SLC23A2Q9UGH3 650 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 IL36AQ9UHA7 158 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 RNF6Q9Y252 685 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 CARD8Q9Y2G2 431 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 PCDHB11Q9Y5F2 797 aa13.2□□□□□ -0.3
EBF3-201ENST00000355311 WDFY4Q6ZS81 3184 aa13.19□□□□□ -0.3
EBF3-201ENST00000355311 SCAMP2O15127 329 aaKnown RBP13.19□□□□□ -0.3
EBF3-201ENST00000355311 MOSPD3O75425 235 aa13.19□□□□□ -0.3
EBF3-201ENST00000355311 POP7O75817 140 aaKnown RBP13.19□□□□□ -0.3
EBF3-201ENST00000355311 ADRA2AP08913 450 aa13.19□□□□□ -0.3
EBF3-201ENST00000355311 C8orf89P0DMQ9 161 aa13.19□□□□□ -0.3
EBF3-201ENST00000355311 CEBPBP17676 345 aa13.19□□□□□ -0.3
EBF3-201ENST00000355311 VIPR1P32241 457 aa13.19□□□□□ -0.3
EBF3-201ENST00000355311 SLC7A9P82251 487 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms