RNA–Protein interactions for RNA: ENST00000355301.8

NPHP1-202, Transcript of nephrocystin 1, humanhuman

TSL 1 (best) BASIC

Gene NPHP1, Length 1,932 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-202ENST00000355301 TMEM181Q9P2C4 612 aa9.13□□□□□ -0.95
NPHP1-202ENST00000355301 ABCD2Q9UBJ2 740 aa9.13□□□□□ -0.95
NPHP1-202ENST00000355301 ASB4Q9Y574 426 aa9.13□□□□□ -0.95
NPHP1-202ENST00000355301 SLC22A7Q9Y694 548 aa9.13□□□□□ -0.95
NPHP1-202ENST00000355301 PRSS51A0A1B0GVH4 220 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 CPED1A4D0V7 1026 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 RNASET2O00584 256 aaKnown RBP9.12□□□□□ -0.95
NPHP1-202ENST00000355301 MAP3K7O43318 606 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 GUCY1B2O75343 617 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 ERN1O75460 977 aaKnown RBP9.12□□□□□ -0.95
NPHP1-202ENST00000355301 RETP07949 1114 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 DRD2P14416 443 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 ALOX12P18054 663 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 ZNF10P21506 573 aaPredicted RBP9.12□□□□□ -0.95
NPHP1-202ENST00000355301 CERS1P27544 350 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 PTPN6P29350 595 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 RP1P56715 2156 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 ELF3P78545 371 aaPredicted RBP9.12□□□□□ -0.95
NPHP1-202ENST00000355301 HSD11B2P80365 405 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 LRRC74AQ0VAA2 488 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 SLAMF1Q13291 335 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 CAPRIN1Q14444 709 aaKnown RBP9.12□□□□□ -0.95
NPHP1-202ENST00000355301 DEFB110Q30KQ9 67 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 WASHC2DQ5SRD0 308 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 C6orf10Q5SRN2 563 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 ANXA8L1Q5VT79 327 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 ANKRD26P1Q6NSI1 321 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 DGLUCYQ7Z3D6 616 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 KMT5CQ86Y97 462 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 ARHGEF39Q8N4T4 335 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 VPS37AQ8NEZ2 397 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 PPCDCQ96CD2 204 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 COL25A1Q9BXS0 654 aaPredicted RBP9.12□□□□□ -0.95
NPHP1-202ENST00000355301 ASXL3Q9C0F0 2248 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 COPS7BQ9H9Q2 264 aaPredicted RBP9.12□□□□□ -0.95
NPHP1-202ENST00000355301 MIEF1Q9NQG6 463 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 ENAMQ9NRM1 1142 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 SOHLH2Q9NX45 425 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 TEX10Q9NXF1 929 aaPredicted RBP9.12□□□□□ -0.95
NPHP1-202ENST00000355301 TMEM9Q9P0T7 183 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 SH3BP4Q9P0V3 963 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 KLHL3Q9UH77 587 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 PLCL2Q9UPR0 1127 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 NEUROG3Q9Y4Z2 214 aa9.12□□□□□ -0.95
NPHP1-202ENST00000355301 A0A096LPI6 279 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 TRBV5-3A0A0A0MS03 114 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 C15orf38-AP3S2A0A0A6YYH1 394 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 A0A1W2PQM1 296 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 CASC3O15234 703 aaKnown RBP9.11□□□□□ -0.95
NPHP1-202ENST00000355301 PDE5AO76074 875 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 CPNE6O95741 557 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 B3GALT4O96024 378 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 ZNF806P0C7X5 589 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 MSL3P1P0C860 447 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 HOXB9P17482 250 aaPredicted RBP9.11□□□□□ -0.95
NPHP1-202ENST00000355301 MLLT3P42568 568 aaPredicted RBP9.11□□□□□ -0.95
NPHP1-202ENST00000355301 GRK6P43250 576 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 TRPC1P48995 793 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 DUSP3P51452 185 aaPredicted RBP9.11□□□□□ -0.95
NPHP1-202ENST00000355301 SLC7A2P52569 658 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 SNRPNP63162 240 aaKnown RBP9.11□□□□□ -0.95
NPHP1-202ENST00000355301 BTN3A2P78410 334 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 CEACAM7Q14002 265 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 PRTGQ2VWP7 1150 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 ZNF385BQ569K4 471 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 SAMD4BQ5PRF9 694 aaKnown RBP9.11□□□□□ -0.95
NPHP1-202ENST00000355301 NDUFAF5Q5TEU4 345 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 NANOGP8Q6NSW7 305 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 TMEM71Q6P5X7 295 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 ARPINQ7Z6K5 226 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 ANKRD46Q86W74 232 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 HPS6Q86YV9 775 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 TICAM1Q8IUC6 712 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 SLC15A3Q8IY34 581 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 NATD1Q8N6N6 113 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 SUMF1Q8NBK3 374 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 ZCCHC10Q8TBK6 192 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 DNAJB14Q8TBM8 379 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 KLHL6Q8WZ60 621 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 SLC41A2Q96JW4 573 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 CCDC115Q96NT0 180 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 ANKRD27Q96NW4 1050 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 SERINC2Q96SA4 455 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 CGREF1Q99674 301 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 NUDT22Q9BRQ3 303 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 PAIP1Q9H074 479 aaKnown RBP9.11□□□□□ -0.95
NPHP1-202ENST00000355301 ZMYND15Q9H091 742 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 NANOGQ9H9S0 305 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 LYARQ9NX58 379 aaKnown RBP9.11□□□□□ -0.95
NPHP1-202ENST00000355301 TAS2R7Q9NYW3 318 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 ADA2Q9NZK5 511 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 EHD3Q9NZN3 535 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 VAPAQ9P0L0 249 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 PDP2Q9P2J9 529 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 BTNL2Q9UIR0 455 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 ATG4BQ9Y4P1 393 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 PCDHA9Q9Y5H5 950 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 CROCCQ5TZA2 2017 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 UNC13CQ8NB66 2214 aa9.11□□□□□ -0.95
NPHP1-202ENST00000355301 PRORSD1PA6NEY8 169 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms