RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 FARS2O95363 451 aaKnown RBP12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 C6orf47O95873 294 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 TUBG1P23258 451 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 PRKXP51817 358 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 TLE2Q04725 743 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 PPIGQ13427 754 aaKnown RBP eCLIP12.27□□□□□ -0.444e-19■□□□□ 9.7
SYNCRIP-201ENST00000355238 GRB7Q14451 532 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 PRAMEF14Q5SWL7 426 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 PRAMEF13Q5VWM6 474 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 CHST9Q7L1S5 443 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 RNF130Q86XS8 419 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 ZNF584Q8IVC4 421 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 PHB2Q99623 299 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 EPYCQ99645 322 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 RHCGQ9UBD6 479 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 HEBP2Q9Y5Z4 205 aa12.27□□□□□ -0.44
SYNCRIP-201ENST00000355238 PPLO60437 1756 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 PQBP1O60828 265 aaKnown RBP12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 FAM163BP0C2L3 166 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 CA5AP35218 305 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 GLP1RP43220 463 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 PROX2Q3B8N5 592 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR7G1Q8NGA0 311 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 ZCCHC10Q8TBK6 192 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 LCN9Q8WX39 176 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 KCNJ9Q92806 393 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 SNAPC3Q92966 411 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 GPN2Q9H9Y4 310 aaPredicted RBP12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 TEX51A0A1B0GUA7 166 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 F8W036 122 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 RAB3BP20337 219 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 CCND3P30281 292 aaPredicted RBP12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR4D2P58180 307 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 BLOC1S1P78537 153 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 KIAA1324Q6UXG2 1013 aaKnown RBP12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 ZFAND4Q86XD8 727 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 TFAP2CQ92754 450 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 UPF1Q92900 1129 aaKnown RBP eCLIP12.27□□□□□ -0.452e-6■■□□□ 12.5
SYNCRIP-201ENST00000355238 ARL11Q969Q4 196 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 COQ3Q9NZJ6 369 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 MAFFQ9ULX9 164 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 NUDT7P0C024 238 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 KCNC3Q14003 757 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 ALG10Q5BKT4 473 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 BCL2L15Q5TBC7 163 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 STEAP4Q687X5 459 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 SMYD5Q6GMV2 418 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 RPL13AP3Q6NVV1 102 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 GTPBP8Q8N3Z3 284 aaPredicted RBP12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 ZNF527Q8NB42 609 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR2T35Q8NGX2 323 aa12.27□□□□□ -0.45
SYNCRIP-201ENST00000355238 GMFGO60234 142 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 UQCRC2P22695 453 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR1E2P47887 323 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 GALEQ14376 348 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 EIF4HQ15056 248 aaKnown RBP12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 NUBP2Q9Y5Y2 271 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 A0A1W2PQL4 384 aaPredicted RBP12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 TRAPPC13A5PLN9 417 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 MANSC4A6NHS7 340 aaPredicted RBP12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 MMP3P08254 477 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 RHCEP18577 417 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 EPHX2P34913 555 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 LEPRP48357 1165 aaKnown RBP12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 MLLT6P55198 1093 aaPredicted RBP12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 ZNF763Q0D2J5 394 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 KEAP1Q14145 624 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 FGL2Q14314 439 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 BBS10Q8TAM1 723 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 THEM6Q8WUY1 208 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 CNOT9Q92600 299 aaKnown RBP12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 ZNF436Q9C0F3 470 aaPredicted RBP12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 PCDHGA7Q9Y5G6 932 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 IGKV6D-41A0A0C4DH26 115 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 PRAF2O60831 178 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 HSD11B1P28845 292 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 HK3P52790 923 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 CD47Q08722 323 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 VTCN1Q7Z7D3 282 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 ZNF565Q8N9K5 539 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR2T33Q8NG76 320 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 FANK1Q8TC84 345 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 SLC35F5Q8WV83 523 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 CNTNAP3BQ96NU0 1288 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR5B12Q96R08 314 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 SECISBP2Q96T21 854 aaKnown RBP12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 UTS2RQ9UKP6 389 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 CSTBP04080 98 aaKnown RBP12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 SF3A2Q15428 464 aaKnown RBP12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 DUSP28Q4G0W2 176 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 TMEM145Q8NBT3 493 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 CHPT1Q8WUD6 406 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 REEP4Q9H6H4 257 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 ACOT13Q9NPJ3 140 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 OR2S2Q9NQN1 319 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 CENPMQ9NSP4 180 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 SULT1C2O00338 296 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 TAS2R50P59544 299 aa12.26□□□□□ -0.45
SYNCRIP-201ENST00000355238 UNC50Q53HI1 259 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms