RNA–Protein interactions for RNA: ENST00000354679.3

HCFC1R1-202, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 2 BASIC

Gene HCFC1R1, Length 765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-202ENST00000354679 KCNC2Q96PR1 638 aa18.99■□□□□ 0.63
HCFC1R1-202ENST00000354679 ROGDIQ9GZN7 287 aa18.99■□□□□ 0.63
HCFC1R1-202ENST00000354679 MRPL46Q9H2W6 279 aaKnown RBP18.99■□□□□ 0.63
HCFC1R1-202ENST00000354679 IPPKQ9H8X2 491 aa18.99■□□□□ 0.63
HCFC1R1-202ENST00000354679 PSMC3IPQ9P2W1 217 aaPredicted RBP18.99■□□□□ 0.63
HCFC1R1-202ENST00000354679 ADGRE2Q9UHX3 823 aa18.99■□□□□ 0.63
HCFC1R1-202ENST00000354679 VPS4AQ9UN37 437 aa18.99■□□□□ 0.63
HCFC1R1-202ENST00000354679 MMACHCQ9Y4U1 282 aa18.99■□□□□ 0.63
HCFC1R1-202ENST00000354679 SHANK1Q9Y566 2161 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 IGKV3D-11A0A0A0MRZ8 115 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 IQANK1A0A1B0GTG1 560 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 DYTNA2CJ06 578 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 STX16-NPEPL1H3BU86 382 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 STX16O14662 325 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 UGDHO60701 494 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 SH3BGRLO75368 114 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 DDX39BQ13838 428 aaKnown RBP18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 ZNF169Q14929 603 aaPredicted RBP18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 TLR1Q15399 786 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 TMEM35AQ53FP2 167 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 CHSY3Q70JA7 882 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 UBE3DQ7Z6J8 389 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 CYP4X1Q8N118 509 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 CISD2Q8N5K1 135 aaKnown RBP18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 GALNT11Q8NCW6 608 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 SNRNP40Q96DI7 357 aaKnown RBP18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 C19orf60Q96EN9 201 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 CMTM7Q96FZ5 175 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 TBCDQ9BTW9 1192 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 KCNK13Q9HB14 408 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 MMP25Q9NPA2 562 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 NECTIN3Q9NQS3 549 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 PRDM7Q9NQW5 492 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 PLA2G3Q9NZ20 509 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 FETUBQ9UGM5 382 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 TEKT2Q9UIF3 430 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 PCDHGA11Q9Y5H2 935 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 ASH1LQ9NR48 2969 aaKnown RBP18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 LRRK2Q5S007 2527 aa18.98■□□□□ 0.63
HCFC1R1-202ENST00000354679 TCRBV16S1A1N1A0A5B0 115 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 A8MUI8 341 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 TGFB1P01137 390 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 TNFRSF8P28908 595 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 PIK3CBP42338 1070 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 TSFMP43897 325 aaKnown RBP18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 LIM2P55344 173 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 SLC26A5P58743 744 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 ABHD17BQ5VST6 288 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 KHDRBS2Q5VWX1 349 aaKnown RBP18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 ZNF793Q6ZN11 406 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 SCUBE1Q8IWY4 988 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 RNF175Q8N4F7 328 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 FAM47BQ8NA70 645 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 CATSPER1Q8NEC5 780 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 HUS1BQ8NHY5 278 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 ATP6V1E2Q96A05 226 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 REPS1Q96D71 796 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 CCDC77Q9BR77 488 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 NOL11Q9H8H0 719 aaKnown RBP18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 PRTFDC1Q9NRG1 225 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 PCTPQ9UKL6 214 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 DAPP1Q9UN19 280 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 MRPS33Q9Y291 106 aaKnown RBP18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 TSC22D4Q9Y3Q8 395 aa18.97■□□□□ 0.63
HCFC1R1-202ENST00000354679 H0YIV9 168 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 RTCAO00442 366 aaKnown RBP18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 CLDN4O14493 209 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 WDPCPO95876 746 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 ATP5A1P25705 553 aaKnown RBP18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 HNRNPFP52597 415 aaKnown RBP18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 HSD17B7P56937 341 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 PHEXP78562 749 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 ZNF33BQ06732 778 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 RCN2Q14257 317 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 CPSF6Q16630 551 aaKnown RBP eCLIP18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 AP5B1Q2VPB7 878 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 DEPDC1Q5TB30 811 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 ZNF595Q8IYB9 648 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 L3MBTL4Q8NA19 623 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 TMEM52Q8NDY8 209 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 HAS2Q92819 552 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 CSF3RQ99062 836 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 MTERF1Q99551 399 aaKnown RBP18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 SLC29A3Q9BZD2 475 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 RNF32Q9H0A6 362 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 OR51B5Q9H339 312 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 DMRT3Q9NQL9 472 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 ASF1BQ9NVP2 202 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 RNF11Q9Y3C5 154 aa18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 COPG1Q9Y678 874 aaKnown RBP18.96■□□□□ 0.63
HCFC1R1-202ENST00000354679 CPAMD8Q8IZJ3 1885 aa18.95■□□□□ 0.62
HCFC1R1-202ENST00000354679 SAGE2PA6NJ88 616 aa18.95■□□□□ 0.62
HCFC1R1-202ENST00000354679 SAP18O00422 153 aaKnown RBP18.95■□□□□ 0.62
HCFC1R1-202ENST00000354679 CYR61O00622 381 aa18.95■□□□□ 0.62
HCFC1R1-202ENST00000354679 OR7A17O14581 309 aa18.95■□□□□ 0.62
HCFC1R1-202ENST00000354679 CLDN9O95484 217 aa18.95■□□□□ 0.62
HCFC1R1-202ENST00000354679 F10P00742 488 aa18.95■□□□□ 0.62
HCFC1R1-202ENST00000354679 SBK3P0C264 359 aa18.95■□□□□ 0.62
HCFC1R1-202ENST00000354679 GNLYP22749 145 aa18.95■□□□□ 0.62
HCFC1R1-202ENST00000354679 ARL1P40616 181 aaPredicted RBP18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms