RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 DAPL1A0PJW8 107 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 NME4O00746 187 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 NDUFV2P19404 249 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 GKP32189 559 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 EMX2Q04743 252 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 SLC10A7Q0GE19 358 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 GTF2H2Q13888 395 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 RAB33AQ14088 237 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ECM1Q16610 540 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 TCEAL5Q5H9L2 206 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ZNF311Q5JNZ3 666 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 SUSD4Q5VX71 490 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 GTF2H2CQ6P1K8 395 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 SORT1Q99523 831 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 VPS25Q9BRG1 176 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 SLC39A8Q9C0K1 460 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 MYNNQ9NPC7 610 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 COQ4Q9Y3A0 265 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 PHRF1Q9P1Y6 1649 aaKnown RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 RIIAD1A6NNX1 92 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 TNFRSF10BO14763 440 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 SLC34A2O95436 690 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ADAP00813 363 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ESR1P03372 595 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 CPEP16870 476 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 YBX3P16989 372 aaKnown RBP eCLIP4.86□□□□□ -1.631e-12■■□□□ 13.5
SKP1-202ENST00000353411 NRIP1P48552 1158 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 HCCSP53701 268 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 VAMP2P63027 116 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 PUM1Q14671 1186 aaKnown RBP eCLIP4.86□□□□□ -1.631e-10■■□□□ 11.7
SKP1-202ENST00000353411 TKFCQ3LXA3 575 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 LRIF1Q5T3J3 769 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 LYPLAL1Q5VWZ2 237 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 SLC36A4Q6YBV0 504 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 HIST2H3AQ71DI3 136 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 LIX1Q8N485 282 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 FBXW5Q969U6 566 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 MFSD3Q96ES6 412 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 MYO19Q96H55 970 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 HSH2DQ96JZ2 352 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 UROC1Q96N76 676 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 FAM193BQ96PV7 902 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 CSPG4P5Q96PW8 444 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 TRAF4Q9BUZ4 470 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 SLC6A16Q9GZN6 736 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 C11orf54Q9H0W9 315 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 MAFBQ9Y5Q3 323 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 FAM186AA6NE01 2351 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 CIB4A0PJX0 185 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 AGAP14A8MT82 685 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 SCAMP1O15126 338 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 PRODHO43272 600 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 TLR5O60602 858 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 UBXN7O94888 489 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 GSRP00390 522 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 S100GP29377 79 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 AQP1P29972 269 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 EPHX2P34913 555 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ATP5C1P36542 298 aaKnown RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 MRPS10P82664 201 aaKnown RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 TNFRSF17Q02223 184 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 MAD2L1BPQ15013 274 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 DCAF4L1Q3SXM0 396 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 OR10R2Q8NGX6 335 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 OR4L1Q8NH43 312 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 PIGXQ8TBF5 258 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 DYNC2LI1Q8TCX1 351 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 CORO2AQ92828 525 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 WNT8BQ93098 351 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 NECAB3Q96P71 396 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 MCCC1Q96RQ3 725 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 CRAMP1Q96RY5 1269 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 PKMYT1Q99640 499 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 LGR4Q9BXB1 951 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 SLC2A11Q9BYW1 496 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 COA1Q9GZY4 146 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 ST6GALNAC4Q9H4F1 302 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 KCNQ5Q9NR82 932 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 DMAC2Q9NW81 257 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 RNF181Q9P0P0 153 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 MED16Q9Y2X0 877 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 PCDHA2Q9Y5H9 948 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 NPIPA7E9PJI5 369 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 AHSA1O95433 338 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 NPIPA8P0DM63 369 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 AGXTP21549 392 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 PTPN6P29350 595 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 HSD17B2P37059 387 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 CAP2P40123 477 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 KCNJ5P48544 419 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 CD81P60033 236 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 GHRHRQ02643 423 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 KIAA0930Q6ICG6 404 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 B3GNT8Q7Z7M8 397 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 LURAP1LQ8IV03 231 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 CDH26Q8IXH8 852 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 OR8J1Q8NGP2 316 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 GRAPLQ8TC17 118 aaPredicted RBP4.86□□□□□ -1.63
SKP1-202ENST00000353411 SNX33Q8WV41 574 aa4.86□□□□□ -1.63
SKP1-202ENST00000353411 COQ8BQ96D53 544 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms