RNA–Protein interactions for RNA: ENST00000349748.7

CAPN3-203, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-203ENST00000349748 ALKBH1Q13686 389 aaKnown RBP10.23□□□□□ -0.77
CAPN3-203ENST00000349748 C22orf42Q6IC83 251 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 SWSAP1Q6NVH7 229 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 KDELC2Q7Z4H8 507 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 VTCN1Q7Z7D3 282 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 LDB1Q86U70 411 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-203ENST00000349748 C12orf45Q8N5I9 185 aaPredicted RBP10.23□□□□□ -0.77
CAPN3-203ENST00000349748 ZNF454Q8N9F8 522 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 OR1M1Q8NGA1 313 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 OR4F6Q8NGB9 312 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 GPR150Q8NGU9 434 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 CLEC4CQ8WTT0 213 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 ASZ1Q8WWH4 475 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 SCRN2Q96FV2 425 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 PEX11GQ96HA9 241 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 ZNF226Q9NYT6 803 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 COX16Q9P0S2 106 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 CLEC2DQ9UHP7 191 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 SLC6A5Q9Y345 797 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 LACTBL1A8MY62 500 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 SCAMP1O15126 338 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 LRRTM2O43300 516 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 PRKRAO75569 313 aaKnown RBP10.23□□□□□ -0.77
CAPN3-203ENST00000349748 S100A9P06702 114 aaKnown RBP10.23□□□□□ -0.77
CAPN3-203ENST00000349748 FPR1P21462 350 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 FPR3P25089 353 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 DNAJA1P31689 397 aaKnown RBP10.23□□□□□ -0.77
CAPN3-203ENST00000349748 ARL4AP40617 200 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 POU3F4P49335 361 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 P2RY4P51582 365 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 CTBP2P56545 445 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 GPR176Q14439 515 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 TRAM2Q15035 370 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 SF3A2Q15428 464 aaKnown RBP10.23□□□□□ -0.77
CAPN3-203ENST00000349748 TSC22D1Q15714 1073 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 BICRALQ6AI39 1079 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 SYT14Q8NB59 555 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 OR9Q1Q8NGQ5 310 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 RAD51AP1Q96B01 352 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 TMEM209Q96SK2 561 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 BTBD1Q9H0C5 482 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 OR51M1Q9H341 326 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 OR51J1Q9H342 316 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 ACTL8Q9H568 366 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 ANKRA2Q9H9E1 313 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 BEX1Q9HBH7 125 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 DLL4Q9NR61 685 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 PXMP2Q9NR77 195 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 SLC25A37Q9NYZ2 338 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 LHX6Q9UPM6 363 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 PCDHA10Q9Y5I2 948 aa10.23□□□□□ -0.77
CAPN3-203ENST00000349748 ANXA2P2A6NMY6 339 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 ACKR2O00590 384 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 GNRH1P01148 92 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 PRR35P0CG20 571 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 UBA1P22314 1058 aaKnown RBP10.22□□□□□ -0.77
CAPN3-203ENST00000349748 PSMA1P25786 263 aaKnown RBP10.22□□□□□ -0.77
CAPN3-203ENST00000349748 SDC2P34741 201 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 NOS2P35228 1153 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 GPX4P36969 197 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-203ENST00000349748 VLDLRP98155 873 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 CBLN2Q8IUK8 224 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 MSRB3Q8IXL7 192 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 OR8J3Q8NGG0 315 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 SLC13A3Q8WWT9 602 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 ERMAPQ96PL5 475 aaPredicted RBP10.22□□□□□ -0.77
CAPN3-203ENST00000349748 MAP3K3Q99759 626 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 NUSAP1Q9BXS6 441 aaKnown RBP10.22□□□□□ -0.77
CAPN3-203ENST00000349748 DNTTIP1Q9H147 329 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 MAGIXQ9H6Y5 334 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 SLC6A13Q9NSD5 602 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 THUMPD1Q9NXG2 353 aaKnown RBP10.22□□□□□ -0.77
CAPN3-203ENST00000349748 ASH2LQ9UBL3 628 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 PCDHGB7Q9Y5F8 929 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 STYXL1Q9Y6J8 313 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 TUBAL3A6NHL2 446 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 C19orf81C9J6K1 198 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 G3V3Q6 166 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 GPR37O15354 613 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 NBNO60934 754 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 SMIM6P0DI80 62 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 SFNP31947 248 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 GKP32189 559 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 GJA5P36382 358 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 PIK3CGP48736 1102 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 CDKN2DP55273 166 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 PRMT2P55345 433 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 TSPAN5P62079 268 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 SNRPEP62304 92 aaKnown RBP10.22□□□□□ -0.77
CAPN3-203ENST00000349748 MPPE1Q53F39 396 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 ZNF628Q5EBL2 1059 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 C6orf136Q5SQH8 315 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 LIPKQ5VXJ0 399 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 CST9Q5W186 159 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 USP53Q70EK8 1073 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 MIB1Q86YT6 1006 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 CNTN4Q8IWV2 1026 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 LIX1Q8N485 282 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 PHOSPHO1Q8TCT1 267 aa10.22□□□□□ -0.77
CAPN3-203ENST00000349748 HGDQ93099 445 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms