RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 DESI1Q6ICB0 168 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 SLC7A5P1Q8MH63 180 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 TRAM1L1Q8N609 369 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 AMER2Q8N7J2 671 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 AP2M1Q96CW1 435 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 MAGEB10Q96LZ2 347 aaPredicted RBP17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 WFDC6Q9BQY6 131 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 ABCG4Q9H172 646 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 C14orf119Q9NWQ9 140 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 CORO2BQ9UQ03 480 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 TRBC2A0A5B9 178 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 H3BM21 787 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 AGRPO00253 132 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 FFAR1O14842 300 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 ZW10O43264 779 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 KIAA0513O60268 411 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 AP2A2O94973 939 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 GSTT2P0CG29 244 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 GSTT2BP0CG30 244 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 CKMT1AP12532 417 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 PUM1Q14671 1186 aaKnown RBP eCLIP17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 ZNF284Q2VY69 593 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 BRAT1Q6PJG6 821 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 METTL4Q8N3J2 472 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 PXYLP1Q8TE99 480 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 SPATA9Q9BWV2 254 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 BHLHE41Q9C0J9 482 aaPredicted RBP17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 C5AR2Q9P296 337 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 PLAGL1Q9UM63 463 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 WDR37Q9Y2I8 494 aa17.3■□□□□ 0.36
PTP4A3-202ENST00000349124 GADD45GO95257 159 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 SOX14O95416 240 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 CHMP24386 653 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 XCR1P46094 333 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 TECPR1Q7Z6L1 1165 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 STARD8Q92502 1023 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 SLC6A16Q9GZN6 736 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 ZNF556Q9HAH1 456 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 SIAEQ9HAT2 523 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 PRKAB1Q9Y478 270 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 PCM1Q15154 2024 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 TRBV4-1A0A0J9YWV2 114 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 RTCAO00442 366 aaKnown RBP17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 PLK4O00444 970 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 SNPHO15079 494 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 GPR37L1O60883 481 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 IL3P08700 152 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 CYP2A6P11509 494 aaPredicted RBP17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 ZNF30P17039 623 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 PXNP49023 591 aaPredicted RBP17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 LIMK1P53667 647 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 ZNF33BQ06732 778 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 ATAD3BQ5T9A4 648 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 GDPD3Q7L5L3 318 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 DDX53Q86TM3 631 aaKnown RBP17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 PIP5K1AQ99755 562 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 EHD1Q9H4M9 534 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 C11orf16Q9NQ32 467 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 DMRT3Q9NQL9 472 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 ERVK13-1Q9NX77 482 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 CLEC2DQ9UHP7 191 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 HCN4Q9Y3Q4 1203 aa17.29■□□□□ 0.36
PTP4A3-202ENST00000349124 A0A1W2PRB8 838 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 PIPSLA2A3N6 862 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 SEMA7AO75326 666 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 XPAP23025 273 aaPredicted RBP17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 OPRD1P41143 372 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 PIK3CBP42338 1070 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 PRLHRP49683 370 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 LIM2P55344 173 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 IRF3Q14653 427 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 TMEM53Q6P2H8 277 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 TNFAIP8L2Q6P589 184 aaPredicted RBP17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 LIPIQ6XZB0 460 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 PTCHD4Q6ZW05 846 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 RBM45Q8IUH3 476 aaKnown RBP17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 CELF2-AS1Q8N7Q2 184 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 DENND6BQ8NEG7 585 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 GOT1L1Q8NHS2 421 aaPredicted RBP17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 RAD9AQ99638 391 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 MGLLQ99685 303 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 ZSCAN5AQ9BUG6 496 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 CEP44Q9C0F1 390 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 NMNAT1Q9HAN9 279 aaPredicted RBP17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 TAS2R9Q9NYW1 312 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 LILRB3O75022 631 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 COQ9O75208 318 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 PCSK2P16519 638 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 SYN1P17600 705 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 NR4A2P43354 598 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 TGM4P49221 684 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 LRRC74AQ0VAA2 488 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 FAM71E1Q6IPT2 247 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 LSRQ86X29 649 aaPredicted RBP17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 LACC1Q8IV20 430 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 VN1R2Q8NFZ6 395 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 VANGL1Q8TAA9 524 aaPredicted RBP17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 RAB8BQ92930 207 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 IRF7Q92985 503 aa17.28■□□□□ 0.36
PTP4A3-202ENST00000349124 OR2AG1Q9H205 316 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms