RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 MTAPQ13126 283 aa17.08■□□□□ 0.32
APP-202ENST00000348990 CRTC2Q53ET0 693 aaPredicted RBP17.08■□□□□ 0.32
APP-202ENST00000348990 YIF1BQ5BJH7 314 aa17.08■□□□□ 0.32
APP-202ENST00000348990 ANXA8L1Q5VT79 327 aa17.08■□□□□ 0.32
APP-202ENST00000348990 GPR26Q8NDV2 337 aa17.08■□□□□ 0.32
APP-202ENST00000348990 UBTD2Q8WUN7 234 aa17.08■□□□□ 0.32
APP-202ENST00000348990 TMEM80Q96HE8 168 aa17.08■□□□□ 0.32
APP-202ENST00000348990 CDCA4Q9BXL8 241 aa17.08■□□□□ 0.32
APP-202ENST00000348990 RDH14Q9HBH5 336 aa17.08■□□□□ 0.32
APP-202ENST00000348990 ASAH2Q9NR71 780 aa17.08■□□□□ 0.32
APP-202ENST00000348990 STUB1Q9UNE7 303 aa17.08■□□□□ 0.32
APP-202ENST00000348990 PRAMEF33A0A0G2JMD5 474 aa17.08■□□□□ 0.32
APP-202ENST00000348990 SCAMP2O15127 329 aaKnown RBP17.08■□□□□ 0.32
APP-202ENST00000348990 PRAMEF10O60809 474 aa17.08■□□□□ 0.32
APP-202ENST00000348990 CSO75390 466 aaKnown RBP17.08■□□□□ 0.32
APP-202ENST00000348990 IFNW1P05000 195 aa17.08■□□□□ 0.32
APP-202ENST00000348990 CSF3P09919 207 aa17.08■□□□□ 0.32
APP-202ENST00000348990 SLC2A2P11168 524 aaPredicted RBP17.08■□□□□ 0.32
APP-202ENST00000348990 APEX1P27695 318 aaKnown RBP17.08■□□□□ 0.32
APP-202ENST00000348990 SDC2P34741 201 aa17.08■□□□□ 0.32
APP-202ENST00000348990 CSKP41240 450 aa17.08■□□□□ 0.32
APP-202ENST00000348990 MAN2A2P49641 1150 aa17.08■□□□□ 0.32
APP-202ENST00000348990 FAPQ12884 760 aa17.08■□□□□ 0.32
APP-202ENST00000348990 IL18Q14116 193 aa17.08■□□□□ 0.32
APP-202ENST00000348990 ATP13A5Q4VNC0 1218 aa17.08■□□□□ 0.32
APP-202ENST00000348990 IER5LQ5T953 404 aa17.08■□□□□ 0.32
APP-202ENST00000348990 DEF8Q6ZN54 512 aa17.08■□□□□ 0.32
APP-202ENST00000348990 ZIC5Q96T25 663 aa17.08■□□□□ 0.32
APP-202ENST00000348990 PIP5K1AQ99755 562 aa17.08■□□□□ 0.32
APP-202ENST00000348990 MAPKAP1Q9BPZ7 522 aa17.08■□□□□ 0.32
APP-202ENST00000348990 FKBP14Q9NWM8 211 aa17.08■□□□□ 0.32
APP-202ENST00000348990 ING3Q9NXR8 418 aa17.08■□□□□ 0.32
APP-202ENST00000348990 LHX3Q9UBR4 397 aa17.08■□□□□ 0.32
APP-202ENST00000348990 MAPRE3Q9UPY8 281 aa17.08■□□□□ 0.32
APP-202ENST00000348990 MYO16Q9Y6X6 1858 aa17.08■□□□□ 0.32
APP-202ENST00000348990 E7EQ34 232 aa17.07■□□□□ 0.32
APP-202ENST00000348990 COCHO43405 550 aa17.07■□□□□ 0.32
APP-202ENST00000348990 SCG5P05408 212 aa17.07■□□□□ 0.32
APP-202ENST00000348990 SRCP12931 536 aa17.07■□□□□ 0.32
APP-202ENST00000348990 PCGF2P35227 344 aa17.07■□□□□ 0.32
APP-202ENST00000348990 KIR2DL3P43628 341 aa17.07■□□□□ 0.32
APP-202ENST00000348990 OR3A3P47888 321 aa17.07■□□□□ 0.32
APP-202ENST00000348990 MC1RQ01726 317 aa17.07■□□□□ 0.32
APP-202ENST00000348990 HYAL2Q12891 473 aa17.07■□□□□ 0.32
APP-202ENST00000348990 DOC2AQ14183 400 aa17.07■□□□□ 0.32
APP-202ENST00000348990 ADGRF1Q5T601 910 aa17.07■□□□□ 0.32
APP-202ENST00000348990 MLIPQ5VWP3 458 aa17.07■□□□□ 0.32
APP-202ENST00000348990 SERPINA13PQ6UXR4 307 aa17.07■□□□□ 0.32
APP-202ENST00000348990 IQCF1Q8N6M8 205 aa17.07■□□□□ 0.32
APP-202ENST00000348990 ZFP41Q8N8Y5 198 aa17.07■□□□□ 0.32
APP-202ENST00000348990 ZNF557Q8N988 423 aaPredicted RBP17.07■□□□□ 0.32
APP-202ENST00000348990 OR8J2Q8NGG1 315 aa17.07■□□□□ 0.32
APP-202ENST00000348990 FOXJ1Q92949 421 aa17.07■□□□□ 0.32
APP-202ENST00000348990 TRAPPC4Q9Y296 219 aa17.07■□□□□ 0.32
APP-202ENST00000348990 YARS2Q9Y2Z4 477 aaKnown RBP17.07■□□□□ 0.32
APP-202ENST00000348990 ANKRD36A6QL64 1941 aa17.07■□□□□ 0.32
APP-202ENST00000348990 CCDC88CQ9P219 2028 aa17.07■□□□□ 0.32
APP-202ENST00000348990 OR2AG2A6NM03 316 aa17.07■□□□□ 0.32
APP-202ENST00000348990 GAPDHSO14556 408 aaPredicted RBP17.07■□□□□ 0.32
APP-202ENST00000348990 LRRTM2O43300 516 aa17.07■□□□□ 0.32
APP-202ENST00000348990 TLX2O43763 284 aaPredicted RBP17.07■□□□□ 0.32
APP-202ENST00000348990 PLOD3O60568 738 aa17.07■□□□□ 0.32
APP-202ENST00000348990 JUPP14923 745 aa17.07■□□□□ 0.32
APP-202ENST00000348990 ERP29P30040 261 aaKnown RBP17.07■□□□□ 0.32
APP-202ENST00000348990 CSTF2P33240 577 aaKnown RBP eCLIP17.07■□□□□ 0.32
APP-202ENST00000348990 RPS5P46782 204 aaKnown RBP17.07■□□□□ 0.32
APP-202ENST00000348990 HBA1P69905 142 aa17.07■□□□□ 0.32
APP-202ENST00000348990 WSCD2Q2TBF2 565 aa17.07■□□□□ 0.32
APP-202ENST00000348990 PRSS55Q6UWB4 352 aaPredicted RBP17.07■□□□□ 0.32
APP-202ENST00000348990 MACC1Q6ZN28 852 aa17.07■□□□□ 0.32
APP-202ENST00000348990 MSANTD1Q6ZTZ1 278 aa17.07■□□□□ 0.32
APP-202ENST00000348990 DTX3Q8N9I9 347 aa17.07■□□□□ 0.32
APP-202ENST00000348990 WBP2Q969T9 261 aa17.07■□□□□ 0.32
APP-202ENST00000348990 TSSK6Q9BXA6 273 aa17.07■□□□□ 0.32
APP-202ENST00000348990 IFNA14P01570 189 aa17.06■□□□□ 0.32
APP-202ENST00000348990 SERINC5Q86VE9 423 aa17.06■□□□□ 0.32
APP-202ENST00000348990 GEMIN6Q8WXD5 167 aaKnown RBP17.06■□□□□ 0.32
APP-202ENST00000348990 CIDECQ96AQ7 238 aaPredicted RBP17.06■□□□□ 0.32
APP-202ENST00000348990 MED30Q96HR3 178 aa17.06■□□□□ 0.32
APP-202ENST00000348990 MS4A4AQ96JQ5 239 aa17.06■□□□□ 0.32
APP-202ENST00000348990 RIPOR3Q96MK2 946 aa17.06■□□□□ 0.32
APP-202ENST00000348990 ACER3Q9NUN7 267 aa17.06■□□□□ 0.32
APP-202ENST00000348990 ZNF282Q9UDV7 671 aaPredicted RBP17.06■□□□□ 0.32
APP-202ENST00000348990 SNX11Q9Y5W9 270 aa17.06■□□□□ 0.32
APP-202ENST00000348990 CASKO14936 926 aa17.06■□□□□ 0.32
APP-202ENST00000348990 MPZL2O60487 215 aa17.06■□□□□ 0.32
APP-202ENST00000348990 GCM2O75603 506 aaPredicted RBP17.06■□□□□ 0.32
APP-202ENST00000348990 CD160O95971 181 aa17.06■□□□□ 0.32
APP-202ENST00000348990 GABRB1P18505 474 aa17.06■□□□□ 0.32
APP-202ENST00000348990 CBLP22681 906 aa17.06■□□□□ 0.32
APP-202ENST00000348990 EFR3AQ14156 821 aa17.06■□□□□ 0.32
APP-202ENST00000348990 NCF4Q15080 339 aa17.06■□□□□ 0.32
APP-202ENST00000348990 ATAT1Q5SQI0 421 aa17.06■□□□□ 0.32
APP-202ENST00000348990 ABI3BPQ7Z7G0 1075 aa17.06■□□□□ 0.32
APP-202ENST00000348990 TIGD4Q8IY51 512 aa17.06■□□□□ 0.32
APP-202ENST00000348990 PGBD3Q8N328 593 aa17.06■□□□□ 0.32
APP-202ENST00000348990 ENOPH1Q9UHY7 261 aa17.06■□□□□ 0.32
APP-202ENST00000348990 STC2O76061 302 aa17.06■□□□□ 0.32
APP-202ENST00000348990 RPS26P62854 115 aaKnown RBP17.06■□□□□ 0.32
APP-202ENST00000348990 SYT14Q8NB59 555 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms