RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 COL9A2Q14055 689 aaPredicted RBP25.65■■□□□ 1.7
SSBP4-202ENST00000348495 IL11RAQ14626 422 aa25.65■■□□□ 1.7
SSBP4-202ENST00000348495 SLC9A5Q14940 896 aa25.65■■□□□ 1.7
SSBP4-202ENST00000348495 FOXR1Q6PIV2 292 aa25.65■■□□□ 1.7
SSBP4-202ENST00000348495 DEPDC7Q96QD5 511 aa25.65■■□□□ 1.7
SSBP4-202ENST00000348495 FBXO8Q9NRD0 319 aa25.65■■□□□ 1.7
SSBP4-202ENST00000348495 EXO1Q9UQ84 846 aaKnown RBP25.65■■□□□ 1.7
SSBP4-202ENST00000348495 CLCA2Q9UQC9 943 aa25.65■■□□□ 1.7
SSBP4-202ENST00000348495 SCN3AQ9NY46 2000 aa25.64■■□□□ 1.7
SSBP4-202ENST00000348495 B4E171 279 aa25.64■■□□□ 1.7
SSBP4-202ENST00000348495 PRMT3O60678 531 aa25.64■■□□□ 1.7
SSBP4-202ENST00000348495 CCL4P13236 92 aa25.64■■□□□ 1.7
SSBP4-202ENST00000348495 IL12AP29459 219 aa25.64■■□□□ 1.7
SSBP4-202ENST00000348495 TSPAN7P41732 249 aa25.64■■□□□ 1.7
SSBP4-202ENST00000348495 FAM71E1Q6IPT2 247 aa25.64■■□□□ 1.7
SSBP4-202ENST00000348495 NIPAL1Q6NVV3 410 aa25.64■■□□□ 1.7
SSBP4-202ENST00000348495 CYB5D1Q6P9G0 228 aa25.64■■□□□ 1.7
SSBP4-202ENST00000348495 IKBIPQ70UQ0 350 aa25.64■■□□□ 1.7
SSBP4-202ENST00000348495 KRTCAP2Q8N6L1 136 aa25.64■■□□□ 1.7
SSBP4-202ENST00000348495 OR9A4Q8NGU2 314 aa25.64■■□□□ 1.7
SSBP4-202ENST00000348495 DPY30Q9C005 99 aa25.64■■□□□ 1.7
SSBP4-202ENST00000348495 APMAPQ9HDC9 416 aa25.64■■□□□ 1.7
SSBP4-202ENST00000348495 B3GALT2O43825 422 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 DNAJB6O75190 326 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 NSA2O95478 260 aaKnown RBP25.63■■□□□ 1.69
SSBP4-202ENST00000348495 PRPS1L1P21108 318 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 HNRNPH2P55795 449 aaKnown RBP25.63■■□□□ 1.69
SSBP4-202ENST00000348495 RUNX2Q13950 521 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 KRT72Q14CN4 511 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 AGKQ53H12 422 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 CCDC167Q9P0B6 97 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 KCMF1Q9P0J7 381 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 AKAP7Q9P0M2 348 aaPredicted RBP25.63■■□□□ 1.69
SSBP4-202ENST00000348495 A0A0A6YYC8 382 aaPredicted RBP25.63■■□□□ 1.69
SSBP4-202ENST00000348495 I3L1I5 382 aaPredicted RBP25.63■■□□□ 1.69
SSBP4-202ENST00000348495 SGK494L7N484 410 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 TIAF1O95411 115 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 NOVA1P51513 510 aaKnown RBP25.63■■□□□ 1.69
SSBP4-202ENST00000348495 ARSFP54793 590 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 PPP1R3BQ86XI6 285 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 CACTIN-AS1Q8N1I8 211 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 NUDT8Q8WV74 236 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 MVB12AQ96EY5 273 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 NDC1Q9BTX1 674 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 NPLQ9BXD5 320 aaPredicted RBP25.63■■□□□ 1.69
SSBP4-202ENST00000348495 CLMPQ9H6B4 373 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 LYARQ9NX58 379 aaKnown RBP25.63■■□□□ 1.69
SSBP4-202ENST00000348495 TEX10Q9NXF1 929 aaPredicted RBP25.63■■□□□ 1.69
SSBP4-202ENST00000348495 CDV3Q9UKY7 258 aaKnown RBP25.63■■□□□ 1.69
SSBP4-202ENST00000348495 LOXL2Q9Y4K0 774 aa25.63■■□□□ 1.69
SSBP4-202ENST00000348495 KIF26BQ2KJY2 2108 aa25.62■■□□□ 1.69
SSBP4-202ENST00000348495 ZNF860A6NHJ4 632 aa25.62■■□□□ 1.69
SSBP4-202ENST00000348495 LRATO95237 230 aa25.62■■□□□ 1.69
SSBP4-202ENST00000348495 IL3P08700 152 aa25.62■■□□□ 1.69
SSBP4-202ENST00000348495 PWWP2BQ6NUJ5 590 aa25.62■■□□□ 1.69
SSBP4-202ENST00000348495 BLOC1S3Q6QNY0 202 aa25.62■■□□□ 1.69
SSBP4-202ENST00000348495 TMEM132CQ8N3T6 1108 aa25.62■■□□□ 1.69
SSBP4-202ENST00000348495 MAPKAP1Q9BPZ7 522 aa25.62■■□□□ 1.69
SSBP4-202ENST00000348495 LYRM4Q9HD34 91 aa25.62■■□□□ 1.69
SSBP4-202ENST00000348495 SLC52A3Q9NQ40 469 aa25.62■■□□□ 1.69
SSBP4-202ENST00000348495 DAPP1Q9UN19 280 aa25.62■■□□□ 1.69
SSBP4-202ENST00000348495 ATG4BQ9Y4P1 393 aa25.62■■□□□ 1.69
SSBP4-202ENST00000348495 EBAG9O00559 213 aa25.61■■□□□ 1.69
SSBP4-202ENST00000348495 POLR1CO15160 346 aaPredicted RBP25.61■■□□□ 1.69
SSBP4-202ENST00000348495 LIM2P55344 173 aa25.61■■□□□ 1.69
SSBP4-202ENST00000348495 SKP1P63208 163 aa25.61■■□□□ 1.69
SSBP4-202ENST00000348495 KLC1Q07866 573 aa25.61■■□□□ 1.69
SSBP4-202ENST00000348495 RCAN2Q14206 197 aa25.61■■□□□ 1.69
SSBP4-202ENST00000348495 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.61■■□□□ 1.69
SSBP4-202ENST00000348495 TTLL10Q6ZVT0 673 aa25.61■■□□□ 1.69
SSBP4-202ENST00000348495 RAB11FIP2Q7L804 512 aa25.61■■□□□ 1.69
SSBP4-202ENST00000348495 GPR180Q86V85 440 aa25.61■■□□□ 1.69
SSBP4-202ENST00000348495 GLB1L3Q8NCI6 653 aaPredicted RBP25.61■■□□□ 1.69
SSBP4-202ENST00000348495 OR5T3Q8NGG3 340 aa25.61■■□□□ 1.69
SSBP4-202ENST00000348495 CDC26Q8NHZ8 85 aa25.61■■□□□ 1.69
SSBP4-202ENST00000348495 GFM2Q969S9 779 aaKnown RBP25.61■■□□□ 1.69
SSBP4-202ENST00000348495 TESCQ96BS2 214 aa25.61■■□□□ 1.69
SSBP4-202ENST00000348495 CLK4Q9HAZ1 481 aaKnown RBP25.61■■□□□ 1.69
SSBP4-202ENST00000348495 DHCR7Q9UBM7 475 aaKnown RBP25.61■■□□□ 1.69
SSBP4-202ENST00000348495 SRPK3Q9UPE1 567 aa25.61■■□□□ 1.69
SSBP4-202ENST00000348495 PCDHB3Q9Y5E6 796 aa25.61■■□□□ 1.69
SSBP4-202ENST00000348495 A0A1W2PR48 441 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 FAM234BA2RU67 622 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 C9JVG2 144 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 H0YIG0 161 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 DSCR3O14972 297 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 PROM1O43490 865 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 RDH16O75452 317 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 CLNS1AP54105 237 aaKnown RBP25.6■■□□□ 1.69
SSBP4-202ENST00000348495 OLR1P78380 273 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 PDE7AQ13946 482 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 RHBDD2Q6NTF9 364 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 GK5Q6ZS86 529 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 ARL8BQ9NVJ2 186 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 FBXW2Q9UKT8 454 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 MAPRE3Q9UPY8 281 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 SCAMP2O15127 329 aaKnown RBP25.6■■□□□ 1.69
SSBP4-202ENST00000348495 AKAP10O43572 662 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 UBOX5O94941 541 aa25.6■■□□□ 1.69
SSBP4-202ENST00000348495 POLR2JP52435 117 aaKnown RBP25.6■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms