RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 ANKRD26P1Q6NSI1 321 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 ZCCHC8Q6NZY4 707 aaKnown RBP10.43□□□□□ -0.74
ECM1-201ENST00000346569 TRIM40Q6P9F5 258 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 ARPINQ7Z6K5 226 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 ANKRD46Q86W74 232 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 GATAD2AQ86YP4 633 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 MMP21Q8N119 569 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 ARHGEF39Q8N4T4 335 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 FAM181AQ8N9Y4 354 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 FAM47BQ8NA70 645 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 FAM156AQ8NDB6 213 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 OR4C6Q8NH72 309 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 CDC26Q8NHZ8 85 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 NCSTNQ92542 709 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 GAL3ST3Q96A11 431 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 ASB9Q96DX5 294 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 ZNF583Q96ND8 569 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 ZNF285Q96NJ3 590 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 PRRX2Q99811 253 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 C17orf62Q9BQA9 187 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 TRIM8Q9BZR9 551 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 EPB41L1Q9H4G0 881 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 GAREM1Q9H706 876 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 SUCOQ9UBS9 1254 aaKnown RBP10.43□□□□□ -0.74
ECM1-201ENST00000346569 U3KQA8 63 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 DCHS1Q96JQ0 3298 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 PCDH15Q96QU1 1955 aa10.43□□□□□ -0.74
ECM1-201ENST00000346569 ARHGAP10A1A4S6 786 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 URADA6NGE7 173 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 ARHGAP33O14559 1287 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 RFXANKO14593 260 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 ZSCAN9O15535 394 aaPredicted RBP10.42□□□□□ -0.74
ECM1-201ENST00000346569 KIF1CO43896 1103 aaKnown RBP10.42□□□□□ -0.74
ECM1-201ENST00000346569 SRPX2O60687 465 aaPredicted RBP10.42□□□□□ -0.74
ECM1-201ENST00000346569 C9P02748 559 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 SLC35G6P0C7Q6 338 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 TCN1P20061 433 aaPredicted RBP10.42□□□□□ -0.74
ECM1-201ENST00000346569 CD1CP29017 333 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 FRKP42685 505 aaPredicted RBP10.42□□□□□ -0.74
ECM1-201ENST00000346569 GSK3BP49841 420 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 NUBP1P53384 320 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 RAB8AP61006 207 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 GPLD1P80108 840 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 LIPEQ05469 1076 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 SLAMF1Q13291 335 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 BIRC2Q13490 618 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 MUM1Q2TAK8 710 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 C6orf10Q5SRN2 563 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 IRGCQ6NXR0 463 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 DGLUCYQ7Z3D6 616 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 CALHM3Q86XJ0 350 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 PTRH1Q86Y79 214 aaKnown RBP10.42□□□□□ -0.74
ECM1-201ENST00000346569 TICAM1Q8IUC6 712 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 MCATQ8IVS2 390 aaKnown RBP10.42□□□□□ -0.74
ECM1-201ENST00000346569 NATD1Q8N6N6 113 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 C19orf47Q8N9M1 422 aaKnown RBP10.42□□□□□ -0.74
ECM1-201ENST00000346569 VPS37AQ8NEZ2 397 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 OR6C4Q8NGE1 309 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 OR8K5Q8NH50 307 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 UCN3Q969E3 161 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 PPCDCQ96CD2 204 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 CCDC124Q96CT7 223 aaKnown RBP10.42□□□□□ -0.74
ECM1-201ENST00000346569 ZDHHC12Q96GR4 267 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 TCTN2Q96GX1 697 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 LOXL4Q96JB6 756 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 CD180Q99467 661 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 SH3GL1Q99961 368 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 TRIM4Q9C037 500 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 PCDHAC1Q9H158 963 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 IKZF5Q9H5V7 419 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 DCLRE1BQ9H816 532 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 ATAD3AQ9NVI7 634 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 TEX10Q9NXF1 929 aaPredicted RBP10.42□□□□□ -0.74
ECM1-201ENST00000346569 KCMF1Q9P0J7 381 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 NKX1-2Q9UD57 310 aaPredicted RBP10.42□□□□□ -0.74
ECM1-201ENST00000346569 CES1P1Q9UKY3 287 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 AP3M1Q9Y2T2 418 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 L3MBTL1Q9Y468 752 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 SLC22A7Q9Y694 548 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 TMEM131Q92545 1883 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 CROCCQ5TZA2 2017 aa10.42□□□□□ -0.74
ECM1-201ENST00000346569 IGHV5-51A0A0C4DH38 117 aa10.41□□□□□ -0.74
ECM1-201ENST00000346569 A0A1W2PR48 441 aa10.41□□□□□ -0.74
ECM1-201ENST00000346569 TLCD2A6NGC4 264 aa10.41□□□□□ -0.74
ECM1-201ENST00000346569 PROM1O43490 865 aa10.41□□□□□ -0.74
ECM1-201ENST00000346569 PSMG1O95456 288 aa10.41□□□□□ -0.74
ECM1-201ENST00000346569 LMNAP02545 664 aaKnown RBP10.41□□□□□ -0.74
ECM1-201ENST00000346569 CFIP05156 583 aa10.41□□□□□ -0.74
ECM1-201ENST00000346569 GSNP06396 782 aa10.41□□□□□ -0.74
ECM1-201ENST00000346569 ZNF888P0CJ79 500 aaPredicted RBP10.41□□□□□ -0.74
ECM1-201ENST00000346569 MYF5P13349 255 aa10.41□□□□□ -0.74
ECM1-201ENST00000346569 HTR1EP28566 365 aa10.41□□□□□ -0.74
ECM1-201ENST00000346569 GFERP55789 205 aa10.41□□□□□ -0.74
ECM1-201ENST00000346569 PCBP4P57723 403 aaKnown RBP10.41□□□□□ -0.74
ECM1-201ENST00000346569 BTN3A2P78410 334 aa10.41□□□□□ -0.74
ECM1-201ENST00000346569 TGM3Q08188 693 aa10.41□□□□□ -0.74
ECM1-201ENST00000346569 SUZ12Q15022 739 aaKnown RBP10.41□□□□□ -0.74
ECM1-201ENST00000346569 PRTGQ2VWP7 1150 aa10.41□□□□□ -0.74
ECM1-201ENST00000346569 TRIM61Q5EBN2 209 aa10.41□□□□□ -0.74
ECM1-201ENST00000346569 ZC3H12BQ5HYM0 836 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms