RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 GADD45GO95257 159 aa17.04■□□□□ 0.32
VHL-202ENST00000345392 SOX14O95416 240 aa17.04■□□□□ 0.32
VHL-202ENST00000345392 CSF3P09919 207 aa17.04■□□□□ 0.32
VHL-202ENST00000345392 MVDP53602 400 aa17.04■□□□□ 0.32
VHL-202ENST00000345392 RAE1P78406 368 aaKnown RBP17.04■□□□□ 0.32
VHL-202ENST00000345392 TEKQ02763 1124 aa17.04■□□□□ 0.32
VHL-202ENST00000345392 SCARB2Q14108 478 aa17.04■□□□□ 0.32
VHL-202ENST00000345392 SPHARQ15513 63 aa17.04■□□□□ 0.32
VHL-202ENST00000345392 LIPKQ5VXJ0 399 aa17.04■□□□□ 0.32
VHL-202ENST00000345392 FRMPD2BQ6IN97 320 aa17.04■□□□□ 0.32
VHL-202ENST00000345392 CHST9Q7L1S5 443 aa17.04■□□□□ 0.32
VHL-202ENST00000345392 OR5AK3PQ8NH89 298 aa17.04■□□□□ 0.32
VHL-202ENST00000345392 ZNF840PA6NDX5 716 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 FAM25AB3EWG3 89 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 FAM25CB3EWG5 89 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 FAM25GB3EWG6 89 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 E7EQ34 232 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 EIF3FO00303 357 aaPredicted RBP17.03■□□□□ 0.32
VHL-202ENST00000345392 TMCC2O75069 709 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 MTX2O75431 263 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 IDSP22304 550 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 OR1D2P34982 312 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 CSKP41240 450 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 RPS5P46782 204 aaKnown RBP17.03■□□□□ 0.32
VHL-202ENST00000345392 PRIM2P49643 509 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 CRISP1P54107 249 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 HBA1P69905 142 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 ZNF385BQ569K4 471 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 SYCE2Q6PIF2 218 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 GLCCI1Q86VQ1 547 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 FTSJ1Q9UET6 329 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 MAP4K5Q9Y4K4 846 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 CCDC88CQ9P219 2028 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 A0A0X1KG70 313 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 GNG14A0A1W2PPG7 69 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 SH3D21A4FU49 640 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 NPIPB15A6NHN6 443 aaPredicted RBP17.03■□□□□ 0.32
VHL-202ENST00000345392 ZAR1LA6NP61 321 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 NPIPB8E9PQR5 432 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 BNIP3LO60238 219 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 HBQ1P09105 142 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 CBSLP0DN79 551 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 CBSP35520 551 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 P2RX3P56373 397 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 NKX3-2P78367 333 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 PLD1Q13393 1074 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 LARS2Q15031 903 aaKnown RBP17.03■□□□□ 0.32
VHL-202ENST00000345392 FAM26DQ5JW98 314 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 LYPLAL1Q5VWZ2 237 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 SERPINA13PQ6UXR4 307 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 REM2Q8IYK8 340 aaPredicted RBP17.03■□□□□ 0.32
VHL-202ENST00000345392 GRPEL2Q8TAA5 225 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 WDR20Q8TBZ3 569 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 DIRAS2Q96HU8 199 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 FRMD6Q96NE9 622 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 POLR2J2Q9GZM3 115 aaKnown RBP17.03■□□□□ 0.32
VHL-202ENST00000345392 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.03■□□□□ 0.329e-8■■■■■ 35.1
VHL-202ENST00000345392 NMNAT1Q9HAN9 279 aaPredicted RBP17.03■□□□□ 0.32
VHL-202ENST00000345392 ACOXLQ9NUZ1 547 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 BTNL2Q9UIR0 455 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 LSM2Q9Y333 95 aaKnown RBP17.03■□□□□ 0.32
VHL-202ENST00000345392 ALPK3Q96L96 1907 aa17.03■□□□□ 0.32
VHL-202ENST00000345392 PRRC2BQ5JSZ5 2229 aaKnown RBP17.02■□□□□ 0.32
VHL-202ENST00000345392 A0A1W2PQL4 384 aaPredicted RBP17.02■□□□□ 0.32
VHL-202ENST00000345392 FABP12A6NFH5 140 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 MGAT4DA6NG13 374 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 CBLP22681 906 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 KIR2DL3P43628 341 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 ACLYP53396 1101 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 DOC2AQ14183 400 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 GPR33Q49SQ1 333 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 HECTD3Q5T447 861 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 TPGS1Q6ZTW0 290 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 GPR65Q8IYL9 337 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 DBF4BQ8NFT6 615 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 RASSF5Q8WWW0 418 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 PIP5K1AQ99755 562 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 SPATA9Q9BWV2 254 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 MIXL1Q9H2W2 232 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 TOR4AQ9NXH8 423 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 CORO2BQ9UQ03 480 aa17.02■□□□□ 0.32
VHL-202ENST00000345392 DNMT3AQ9Y6K1 912 aaPredicted RBP17.02■□□□□ 0.32
VHL-202ENST00000345392 ZNF670-ZNF695F2Z2N8 137 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 AP2A2O94973 939 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 HNMTP50135 292 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 CCL23P55773 120 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 HNRNPA0Q13151 305 aaKnown RBP17.02■□□□□ 0.31
VHL-202ENST00000345392 GLYR1Q49A26 553 aaPredicted RBP17.02■□□□□ 0.31
VHL-202ENST00000345392 PDZK1Q5T2W1 519 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 CCDC149Q6ZUS6 474 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 APCDD1Q8J025 514 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 VWA5B2Q8N398 1253 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 HJURPQ8NCD3 748 aaPredicted RBP17.02■□□□□ 0.31
VHL-202ENST00000345392 FBXO22Q8NEZ5 403 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 FOXJ1Q92949 421 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 SLC22A12Q96S37 553 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 SLC35A5Q9BS91 424 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 RNF121Q9H920 327 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 RNF186Q9NXI6 227 aa17.02■□□□□ 0.31
VHL-202ENST00000345392 CASP8AP2Q9UKL3 1982 aa17.02■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms