RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 SEMA3DO95025 777 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 HSPA4LO95757 839 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 PDYNP01213 254 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 CYC1P08574 325 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 FGF4P08620 206 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 ZGLP1P0C6A0 271 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 RNH1P13489 461 aaKnown RBP11.2□□□□□ -0.62
SNCA-202ENST00000345009 TLX1P31314 330 aaPredicted RBP11.2□□□□□ -0.62
SNCA-202ENST00000345009 SSR2P43308 183 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 XCR1P46094 333 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 STX3Q13277 289 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 NKG7Q16617 165 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 IMPG1Q17R60 797 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 OR4C11Q6IEV9 310 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 LCN10Q6JVE6 187 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 CUZD1Q86UP6 607 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 RAB3IL1Q8TBN0 382 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 STT3BQ8TCJ2 826 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.2□□□□□ -0.62
SNCA-202ENST00000345009 DYDC1Q8WWB3 177 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 METTL21AQ8WXB1 218 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 THAP4Q8WY91 577 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 TBC1D20Q96BZ9 403 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 CATSPER2Q96P56 530 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 CCT7Q99832 543 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 ILKAPQ9H0C8 392 aaPredicted RBP11.2□□□□□ -0.62
SNCA-202ENST00000345009 MED4Q9NPJ6 270 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 SEMA3GQ9NS98 782 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 SLC22A11Q9NSA0 550 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 MS4A12Q9NXJ0 267 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 IL17BQ9UHF5 180 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 ZNF225Q9UK10 706 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 SLC12A4Q9UP95 1085 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.2□□□□□ -0.62
SNCA-202ENST00000345009 MRPS2Q9Y399 296 aaKnown RBP11.2□□□□□ -0.62
SNCA-202ENST00000345009 CELSR3Q9NYQ7 3312 aa11.2□□□□□ -0.62
SNCA-202ENST00000345009 SCN3AQ9NY46 2000 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 PKD1L2Q7Z442 2459 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 CACNA1BQ00975 2339 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 IGLV3-12A0A075B6K2 115 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 SERTM1A2A2V5 107 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 BLACEA4D250 179 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 ZNF860A6NHJ4 632 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 VSTM2BA6NLU5 285 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 PEX12O00623 359 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 CLDN4O14493 209 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 UBFD1O14562 309 aaKnown RBP11.19□□□□□ -0.62
SNCA-202ENST00000345009 DYNC1I1O14576 645 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 CHST10O43529 356 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 SH3BGRLO75368 114 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 RDH16O75452 317 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 SASH3O75995 380 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 BMP10O95393 424 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 MED26O95402 600 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 HEXBP07686 556 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 HIST1H1TP22492 207 aaPredicted RBP11.19□□□□□ -0.62
SNCA-202ENST00000345009 ITPKBP27987 946 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 EMP2P54851 167 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 ABCE1P61221 599 aaKnown RBP11.19□□□□□ -0.62
SNCA-202ENST00000345009 PPP2R2AP63151 447 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 ERV3-1Q14264 604 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 TTMPQ5BVD1 217 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 MFSD4BQ5TF39 518 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 ADNP2Q6IQ32 1131 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 CYP20A1Q6UW02 462 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 ZCCHC23Q6ZST2 131 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 NUDT13Q86X67 352 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 PDSS2Q86YH6 399 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 AMER3Q8N944 861 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 ACOT4Q8N9L9 421 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 CRB3Q9BUF7 120 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 SHCBP1LQ9BZQ2 653 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 LYRM4Q9HD34 91 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 MLXIPLQ9NP71 852 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 PRDM7Q9NQW5 492 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 ZNF446Q9NWS9 450 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 HCN3Q9P1Z3 774 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 CTSFQ9UBX1 484 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 PHF11Q9UIL8 331 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 C3orf18Q9UK00 162 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 ADAM29Q9UKF5 820 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 MKL2Q9ULH7 1088 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 TRAF6Q9Y4K3 522 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 TIMM22Q9Y584 194 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 CFAP47Q6ZTR5 3102 aa11.19□□□□□ -0.62
SNCA-202ENST00000345009 A0A0G2JN53 185 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 A0A1B0GTL3 188 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 SYNDIG1LA6NDD5 238 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 K7ENP7 123 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 SLC28A1O00337 649 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 SAP18O00422 153 aaKnown RBP11.18□□□□□ -0.62
SNCA-202ENST00000345009 RGS14O43566 566 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 KLF7O75840 302 aaPredicted RBP11.18□□□□□ -0.62
SNCA-202ENST00000345009 MYO1DO94832 1006 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 F12P00748 615 aaPredicted RBP11.18□□□□□ -0.62
SNCA-202ENST00000345009 FHP07954 510 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 BGNP21810 368 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 F8A1P23610 371 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 MMP11P24347 488 aa11.18□□□□□ -0.62
SNCA-202ENST00000345009 ATP5A1P25705 553 aaKnown RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms