RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 FAM58AQ8N1B3 248 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 LFNGQ8NES3 379 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 OR52H1Q8NGJ2 320 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 IGDCC4Q8TDY8 1250 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 OR8D1Q8WZ84 308 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CD180Q99467 661 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 MTERF1Q99551 399 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 COPS8Q99627 209 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 ASPNQ9BXN1 380 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.97□□□□□ -1.45
VCAN-203ENST00000343200 RYDENQ9NUL5 291 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 SEC14L6B5MCN3 397 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CLDN4O14493 209 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 RHOCP08134 193 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 TFPIP10646 304 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 RPL10P27635 214 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 SGCGQ13326 291 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 UBXN2BQ14CS0 331 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 AGAP7PQ5VUJ5 663 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 AGAP6Q5VW22 663 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 MEDAGQ5VYS4 303 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 ZNF572Q7Z3I7 529 aaPredicted RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 PPP1R3BQ86XI6 285 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 ZNF561Q8N587 486 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 SIGLECL1Q8N7X8 197 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 LPAR1Q92633 364 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 LGALS12Q96DT0 336 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 AGAP4Q96P64 663 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 NELL2Q99435 816 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 ESRP2Q9H6T0 727 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 ERVMER34-1Q9H9K5 563 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CARS2Q9HA77 564 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 ZNF586Q9NXT0 402 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 VNN3Q9NY84 501 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 EXTL2Q9UBQ6 330 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 COPS7AQ9UBW8 275 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 SCML2Q9UQR0 700 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 EXOSC1Q9Y3B2 195 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 PCDHGA7Q9Y5G6 932 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CEP192Q8TEP8 1941 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 NRXN1Q9ULB1 1477 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 JUNP05412 331 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 BPIP17213 487 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 MIPP30301 263 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CASP3P42574 277 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 GRK6P43250 576 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 PITPNBP48739 271 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 HNRNPA3P51991 378 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 ZNF136P52737 540 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 ART1P52961 327 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 PEX6Q13608 980 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 POU4F3Q15319 338 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 TAF9Q16594 264 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 SOHLH1Q5JUK2 328 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 C19orf35Q6ZS72 473 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 ANKS1BQ7Z6G8 1248 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 AKR7LQ8NHP1 331 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 IFI44Q8TCB0 444 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 SLC39A13Q96H72 371 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 MIOSQ9NXC5 875 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 NUDT4Q9NZJ9 180 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 TMPRSS11EQ9UL52 423 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 FBXO7Q9Y3I1 522 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 ERCC6L2Q5T890 1561 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 TRUB2O95900 331 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 AGR2O95994 175 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 TSPAN8P19075 237 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 GPSM2P81274 684 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 HSF1Q00613 529 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 EFEMP1Q12805 493 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 GRAPQ13588 217 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 SPIN4Q56A73 249 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 KIAA1161Q6NSJ0 714 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 TRMT10BQ6PF06 316 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 OR10G2Q8NGC3 310 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 SLC13A3Q8WWT9 602 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 FBXL20Q96IG2 436 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CENPOQ9BU64 300 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CACNG6Q9BXT2 260 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 SEMA6CQ9H3T2 930 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CACNG2Q9Y698 323 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 JCADQ9P266 1359 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 C5orf60A6NFR6 353 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 UBFD1O14562 309 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 HOXB9P17482 250 aaPredicted RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 TPSB2P20231 275 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 ARHGAP1Q07960 439 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 TPSAB1Q15661 275 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 DBX2Q6ZNG2 339 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 BEND4Q6ZU67 534 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 PRELID2Q8N945 189 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 PROKR1Q8TCW9 393 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 CHAC2Q8WUX2 184 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.97□□□□□ -1.45
VCAN-203ENST00000343200 POT1Q9NUX5 634 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 TXNL4BQ9NX01 149 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 MAST2Q6P0Q8 1798 aa5.97□□□□□ -1.45
VCAN-203ENST00000343200 SNRNP70P08621 437 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 MAPTP10636 758 aaKnown RBP5.97□□□□□ -1.45
VCAN-203ENST00000343200 ZNF16P17020 682 aaPredicted RBP5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms