RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 GTF2H5Q6ZYL4 71 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 TRAPPC6BQ86SZ2 158 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 IQCF1Q8N6M8 205 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 HYLS1Q96M11 299 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 BTBD2Q9BX70 525 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 CD300AQ9UGN4 299 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 MANSC4A6NHS7 340 aaPredicted RBP12.42□□□□□ -0.42
USP47-202ENST00000339865 NDUFS4O43181 175 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 CD34P28906 385 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 BEX3Q00994 111 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 RAB35Q15286 201 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 GLT8D1Q68CQ7 371 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 MFSD5Q6N075 450 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 CERS6Q6ZMG9 384 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 SERPINA9Q86WD7 417 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 FN3KRPQ9HA64 309 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 SNX10Q9Y5X0 201 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 NCANO14594 1321 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 WASH4PA8MWX3 477 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 FOXD2O60548 495 aaPredicted RBP12.42□□□□□ -0.42
USP47-202ENST00000339865 FRKP42685 505 aaPredicted RBP12.42□□□□□ -0.42
USP47-202ENST00000339865 CAV2P51636 162 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 ADGRD1Q6QNK2 874 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 KIAA0319LQ8IZA0 1049 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 FTMTQ8N4E7 242 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 OR4C15Q8NGM1 316 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 MRI1Q9BV20 369 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 ADCY10Q96PN6 1610 aa12.42□□□□□ -0.42
USP47-202ENST00000339865 C11orf98E9PRG8 122 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 PRKCGP05129 697 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 MAOAP21397 527 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 PIGGQ5H8A4 983 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 CEACAM19Q7Z692 300 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 OR2A12Q8NGT7 310 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 FANK1Q8TC84 345 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 NDRG1Q92597 394 aaKnown RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 RDH12Q96NR8 316 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 BTBD1Q9H0C5 482 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 ZBTB26Q9HCK0 441 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 CHATP28329 748 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 FMO1Q01740 532 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 PPA1Q15181 289 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 TAF1AQ15573 450 aaPredicted RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 CCBE1Q6UXH8 406 aaPredicted RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 GLYATL1Q969I3 302 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 C17orf62Q9BQA9 187 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 ABCG5Q9H222 651 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 SPATA6Q9NWH7 488 aaPredicted RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 DHDHQ9UQ10 334 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 SCML2Q9UQR0 700 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 LSM5Q9Y4Y9 91 aaKnown RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 RPS10-NUDT3A0A1W2PQS6 291 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 RCCD1A6NED2 376 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 SULT1C2O00338 296 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 B3GALNT1O75752 331 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 PNPP00491 289 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 EPHA1P21709 976 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 EDNRBP24530 442 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 DPP6P42658 865 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 RPS10P46783 165 aaKnown RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 STT3AP46977 705 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 MRPS5P82675 430 aaKnown RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 HTRA4P83105 476 aaPredicted RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 BTN1A1Q13410 526 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 LPAL2Q16609 132 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 PARP15Q460N3 678 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 SMIM15Q7Z3B0 74 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 TMCO2Q7Z6W1 182 aaPredicted RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 PRR18Q8N4B5 295 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 CHTF18Q8WVB6 975 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 ZNF558Q96NG5 402 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 FAM173AQ9BQD7 235 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 B3GNT5Q9BYG0 378 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 EVLQ9UI08 416 aaPredicted RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 BACE2Q9Y5Z0 518 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 A0A1W2PPW3 197 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 DRD5P21918 477 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 ST3GAL3Q11203 375 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 MCATQ8IVS2 390 aaKnown RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 UQCC2Q9BRT2 126 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 ZNF395Q9H8N7 513 aaPredicted RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 THUMPD1Q9NXG2 353 aaKnown RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 SCAF4O95104 1147 aaKnown RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 NDST3O95803 873 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 TFP02787 698 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 RIPPLY1Q0D2K3 151 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 PTCHD3Q3KNS1 767 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 NT5DC1Q5TFE4 455 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 ATG9BQ674R7 924 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 TMPPEQ6ZT21 453 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 OR4K17Q8NGC6 315 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 OR51G2Q8NGK0 314 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 OR6N2Q8NGY6 317 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 DAZAP1Q96EP5 407 aaKnown RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 HS6ST2Q96MM7 605 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 ZNF75AQ96N20 296 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 ZNF641Q96N77 438 aaPredicted RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 ZNF358Q9NW07 568 aa12.41□□□□□ -0.42
USP47-202ENST00000339865 MYEF2Q9P2K5 600 aaKnown RBP12.41□□□□□ -0.42
USP47-202ENST00000339865 NLRP1Q9C000 1473 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms