RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 COX4I1P13073 169 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 DRD2P14416 443 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 CALB2P22676 271 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 CERS1P27544 350 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 NME5P56597 212 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 TAS2R50P59544 299 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 INSM1Q01101 510 aaPredicted RBP13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 SRSF11Q05519 484 aaKnown RBP13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 KLC1Q07866 573 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 STX5Q13190 355 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 CYLC2Q14093 348 aaPredicted RBP13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 COQ5Q5HYK3 327 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 CDCP2Q5VXM1 449 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 MRM1Q6IN84 353 aaKnown RBP13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 FOXR1Q6PIV2 292 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 SNX32Q86XE0 403 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 OR1L3Q8NH93 324 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 CLHC1Q8NHS4 586 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 EGLN2Q96KS0 407 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 C10orf90Q96M02 699 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 PHOX2BQ99453 314 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 CMKLR1Q99788 373 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 NDC1Q9BTX1 674 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 LYRM4Q9HD34 91 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 PRDM9Q9NQV7 894 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 STARD5Q9NSY2 213 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 ATAD3AQ9NVI7 634 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 TOR4AQ9NXH8 423 aa13.79□□□□□ -0.2
NIPAL3-202ENST00000339255 KLHL18O94889 574 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 NSA2O95478 260 aaKnown RBP13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 ESRRAP11474 423 aaPredicted RBP13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 BNIP1Q12981 228 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 SLAMF1Q13291 335 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 CCDC157Q569K6 752 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 FAM71E1Q6IPT2 247 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 CAMKMTQ7Z624 323 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 GPR180Q86V85 440 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 FUNDC1Q8IVP5 155 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 DEFB124Q8NES8 71 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 CDC26Q8NHZ8 85 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 SPDL1Q96EA4 605 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 NSL1Q96IY1 281 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 TEX37Q96LM6 180 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 DEPDC7Q96QD5 511 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 OR6C1Q96RD1 312 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 REEP4Q9H6H4 257 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 MIEF1Q9NQG6 463 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 CUTCQ9NTM9 273 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 ARL8BQ9NVJ2 186 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 EHD3Q9NZN3 535 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 RARRES3Q9UL19 164 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 NAALAD2Q9Y3Q0 740 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 SPACA6W5XKT8 324 aa13.78□□□□□ -0.2
NIPAL3-202ENST00000339255 H0YIG0 161 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 NR5A2O00482 541 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 ANGPT2O15123 496 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 CFLARO15519 480 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 DKK1O94907 266 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 UNC5CO95185 931 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 CBX6O95503 412 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 IL3P08700 152 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 IL1RNP18510 177 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 DDCP20711 480 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 BUD31P41223 144 aaPredicted RBP13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 GCGRP47871 477 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 AVPR1BP47901 424 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 RASSF2P50749 326 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 PDE7AQ13946 482 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 C16orf72Q14CZ0 275 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 FAM174BQ3ZCQ3 159 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 GK5Q6ZS86 529 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 MSANTD1Q6ZTZ1 278 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 DGLUCYQ7Z3D6 616 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 PPP1R3BQ86XI6 285 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 KRTCAP2Q8N6L1 136 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 OR8J2Q8NGG1 315 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 ADAMTS18Q8TE60 1221 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 TM4SF18Q96CE8 201 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 LIN37Q96GY3 246 aaPredicted RBP13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 SPRTNQ9H040 489 aaPredicted RBP13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 WDR41Q9HAD4 459 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 ATP6V1HQ9UI12 483 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 CDC14AQ9UNH5 594 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 MRPS2Q9Y399 296 aaKnown RBP13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 ASB4Q9Y574 426 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 PCDHB3Q9Y5E6 796 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 FER1L5A0AVI2 2057 aa13.77□□□□□ -0.21
NIPAL3-202ENST00000339255 A0A1W2PP18 115 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 CCDC154A6NI56 674 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 B4E171 279 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 TBX19O60806 448 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 LRATO95237 230 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 PGRP06401 933 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 CTSBP07858 339 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 HBQ1P09105 142 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 FURINP09958 794 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 CEACAM1P13688 526 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 COX7A2P14406 83 aa13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 TLX1P31314 330 aaPredicted RBP13.76□□□□□ -0.21
NIPAL3-202ENST00000339255 S100A3P33764 101 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms