RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 ANKRD53Q8N9V6 530 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 CADM4Q8NFZ8 388 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 TSPAN14Q8NG11 270 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 OR10Q1Q8NGQ4 319 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 ZFP90Q8TF47 636 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 FBXL20Q96IG2 436 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 SPACA7Q96KW9 195 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 CAMK1GQ96NX5 476 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 SORBS1Q9BX66 1292 aaKnown RBP10.58□□□□□ -0.72
LRP1-202ENST00000338962 PITHD1Q9GZP4 211 aaPredicted RBP10.58□□□□□ -0.72
LRP1-202ENST00000338962 CLK4Q9HAZ1 481 aaKnown RBP10.58□□□□□ -0.72
LRP1-202ENST00000338962 FGF22Q9HCT0 170 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 RPS6KA6Q9UK32 745 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 PCDHGA2Q9Y5H1 932 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 FEZF1A0PJY2 475 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 LRRC72A6NJI9 287 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 H3BNH8 94 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 PLPP1O14494 284 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 OR1F1O43749 312 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 HPRP00739 348 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 KDELR2P33947 212 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 MAPK12P53778 367 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 IST1P53990 364 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 REEP5Q00765 189 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 APOFQ13790 326 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 CLCA4Q14CN2 919 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 RGNQ15493 299 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 UAP1L1Q3KQV9 507 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 DEPDC1Q5TB30 811 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 TTC33Q6PID6 262 aaPredicted RBP10.58□□□□□ -0.72
LRP1-202ENST00000338962 SPESP1Q6UW49 350 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 C11orf74Q86VG3 221 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 ZNF786Q8N393 782 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 GAB3Q8WWW8 586 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 CIDECQ96AQ7 238 aaPredicted RBP10.58□□□□□ -0.72
LRP1-202ENST00000338962 MPP4Q96JB8 637 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 MS4A8Q9BY19 250 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 XKR8Q9H6D3 395 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 TIMMDC1Q9NPL8 285 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 FAF1Q9UNN5 650 aaPredicted RBP10.58□□□□□ -0.72
LRP1-202ENST00000338962 PLEKHM1Q9Y4G2 1056 aa10.58□□□□□ -0.72
LRP1-202ENST00000338962 MAGED1Q9Y5V3 778 aaPredicted RBP10.58□□□□□ -0.72
LRP1-202ENST00000338962 PRSS38A1L453 326 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 POM121BA6NF01 834 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 SCAMP1O15126 338 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 HRO43593 1189 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 SEC24DO94855 1032 aaPredicted RBP10.57□□□□□ -0.72
LRP1-202ENST00000338962 SEMA4FO95754 770 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 CLIC3O95833 236 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 C6orf47O95873 294 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 THRBP10828 461 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 MAGEA2P43356 314 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 PRDX1Q06830 199 aaKnown RBP10.57□□□□□ -0.72
LRP1-202ENST00000338962 SPIDRQ14159 915 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 DDX59Q5T1V6 619 aaKnown RBP eCLIP10.57□□□□□ -0.72
LRP1-202ENST00000338962 RBM44Q6ZP01 1051 aaKnown RBP10.57□□□□□ -0.72
LRP1-202ENST00000338962 PATL1Q86TB9 770 aaKnown RBP10.57□□□□□ -0.72
LRP1-202ENST00000338962 TRIM69Q86WT6 500 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 ZDHHC21Q8IVQ6 265 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 OFCC1Q8IZS5 231 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 FAM160A2Q8N612 972 aaPredicted RBP10.57□□□□□ -0.72
LRP1-202ENST00000338962 OR52E1Q8NGJ3 308 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 GOT1L1Q8NHS2 421 aaPredicted RBP10.57□□□□□ -0.72
LRP1-202ENST00000338962 ASB12Q8WXK4 309 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 NMD3Q96D46 503 aaKnown RBP10.57□□□□□ -0.72
LRP1-202ENST00000338962 QRFPRQ96P65 431 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 F2RL3Q96RI0 385 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 SLC35A5Q9BS91 424 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 ASPSCR1Q9BZE9 553 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 GRIP2Q9C0E4 1043 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 MVB12BQ9H7P6 319 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 PRDM8Q9NQV8 689 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 BAG5Q9UL15 447 aa10.57□□□□□ -0.72
LRP1-202ENST00000338962 PRR19A6NJB7 356 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 H0YAE9 185 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 RTCAO00442 366 aaKnown RBP10.56□□□□□ -0.72
LRP1-202ENST00000338962 CAPN5O15484 640 aaPredicted RBP10.56□□□□□ -0.72
LRP1-202ENST00000338962 KDM1AO60341 852 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 KLHL18O94889 574 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 TBX6O95947 436 aaPredicted RBP10.56□□□□□ -0.72
LRP1-202ENST00000338962 NUDT7P0C024 238 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 PKLRP30613 574 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 CRATP43155 626 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 CCR5P51681 352 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 CLDN2P57739 230 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 C16orf72Q14CZ0 275 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 TEAD4Q15561 434 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 ABRAXAS1Q6UWZ7 409 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 GALNT10Q86SR1 603 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 NUDT13Q86X67 352 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 C11orf65Q8NCR3 313 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 OR2A1Q8NGT9 310 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 OR2L8Q8NGY9 312 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 MAL2Q969L2 176 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 ZC3H10Q96K80 434 aaKnown RBP10.56□□□□□ -0.72
LRP1-202ENST00000338962 RDH12Q96NR8 316 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 OR2M4Q96R27 311 aa10.56□□□□□ -0.72
LRP1-202ENST00000338962 RBM4BQ9BQ04 359 aaKnown RBP10.56□□□□□ -0.72
LRP1-202ENST00000338962 RBM4Q9BWF3 364 aaKnown RBP10.56□□□□□ -0.72
LRP1-202ENST00000338962 DUSP15Q9H1R2 295 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms