RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 ZNF267Q14586 743 aaPredicted RBP13.33□□□□□ -0.28
SF1-202ENST00000334944 C12orf40Q86WS4 652 aa13.33□□□□□ -0.28
SF1-202ENST00000334944 DEDD2Q8WXF8 326 aa13.33□□□□□ -0.28
SF1-202ENST00000334944 HDHD5Q9BXW7 423 aa13.33□□□□□ -0.28
SF1-202ENST00000334944 TIGARQ9NQ88 270 aa13.33□□□□□ -0.28
SF1-202ENST00000334944 MUTYHQ9UIF7 546 aa13.33□□□□□ -0.28
SF1-202ENST00000334944 TULP3O75386 442 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 C8GP07360 202 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 CCNYL3P0C7X3 344 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 CBSLP0DN79 551 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 CBSP35520 551 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 PRMT2P55345 433 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 DOC2AQ14183 400 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 SPATS1Q496A3 300 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 LINC00299Q6ZSB3 139 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 THOC6Q86W42 341 aaKnown RBP13.32□□□□□ -0.28
SF1-202ENST00000334944 DACT3Q96B18 629 aaPredicted RBP13.32□□□□□ -0.28
SF1-202ENST00000334944 CEP19Q96LK0 163 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 OR4K3Q96R72 315 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 GDF15Q99988 308 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 CPPED1Q9BRF8 314 aaPredicted RBP13.32□□□□□ -0.28
SF1-202ENST00000334944 UGT2B28Q9BY64 529 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 CPEB1Q9BZB8 566 aaKnown RBP13.32□□□□□ -0.28
SF1-202ENST00000334944 MAGEB17A8MXT2 336 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 NUDT7P0C024 238 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 CTRB1P17538 263 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 AMD1P17707 334 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 PTPN6P29350 595 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 POLR2LP62875 67 aaKnown RBP13.32□□□□□ -0.28
SF1-202ENST00000334944 TOP3AQ13472 1001 aaPredicted RBP13.32□□□□□ -0.28
SF1-202ENST00000334944 EFR3AQ14156 821 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 GBX1Q14549 363 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 STARD3Q14849 445 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 BTBD16Q32M84 506 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 IER5LQ5T953 404 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 CTRB2Q6GPI1 263 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 LRRC70Q7Z2Q7 622 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 CYP4Z1Q86W10 505 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 HORMAD1Q86X24 394 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 ASZ1Q8WWH4 475 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 MAL2Q969L2 176 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 SH3KBP1Q96B97 665 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 TRMT61AQ96FX7 289 aaKnown RBP13.32□□□□□ -0.28
SF1-202ENST00000334944 SLC29A3Q9BZD2 475 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 EVA1BQ9NVM1 165 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 ABCG2Q9UNQ0 655 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 RNF6Q9Y252 685 aa13.32□□□□□ -0.28
SF1-202ENST00000334944 ATG2BQ96BY7 2078 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 TRBV5-3A0A0A0MS03 114 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 LEUTXA8MZ59 168 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 GFYI3L273 518 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 TIMP1P01033 207 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 LAMP1P11279 417 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 COX7A2P14406 83 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 SYN1P17600 705 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 CTNNB1P35222 781 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 DCTP40126 519 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 VIPR2P41587 438 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 KIR3DL1P43629 444 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 HKDC1Q2TB90 917 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 PRSS48Q7RTY5 328 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 TMEM132CQ8N3T6 1108 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 C12orf76Q8N812 135 aaPredicted RBP13.31□□□□□ -0.28
SF1-202ENST00000334944 SLC7A6Q92536 515 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 TMEM159Q96B96 161 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 AP2M1Q96CW1 435 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 OR2A14Q96R47 310 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 GORASP2Q9H8Y8 452 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 SCN3BQ9NY72 215 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 TMEFF2Q9UIK5 374 aaPredicted RBP13.31□□□□□ -0.28
SF1-202ENST00000334944 C3orf18Q9UK00 162 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 SH2B3Q9UQQ2 575 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 WASH3PC4AMC7 463 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 TRIM77I1YAP6 450 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 FPGTO14772 594 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 CAPN5O15484 640 aaPredicted RBP13.31□□□□□ -0.28
SF1-202ENST00000334944 OR7A10O76100 309 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 ENGP17813 658 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 VIPR1P32241 457 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 TGM4P49221 684 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 UGT8Q16880 541 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 GPAT3Q53EU6 434 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 TMEM220Q6QAJ8 160 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 AGTRAPQ6RW13 159 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 ANGPTL8Q6UXH0 198 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 METTL3Q86U44 580 aaKnown RBP13.31□□□□□ -0.28
SF1-202ENST00000334944 GLCCI1Q86VQ1 547 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 AMER2Q8N7J2 671 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 MRGPRX3Q96LB0 322 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 DCAF13Q9NV06 445 aaKnown RBP13.31□□□□□ -0.28
SF1-202ENST00000334944 DNAJB9Q9UBS3 223 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 TPRKBQ9Y3C4 175 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 PPIL1Q9Y3C6 166 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 ELFN1P0C7U0 828 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 IL12RB1P42701 662 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 NUDT6P53370 316 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 HOXC5Q00444 222 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 ZMYND11Q15326 602 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 BAK1Q16611 211 aa13.31□□□□□ -0.28
SF1-202ENST00000334944 Q6ZPB1 254 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms