RNA–Protein interactions for RNA: ENST00000334389.5

LINC00643-201, long intergenic non-protein coding RNA 643, humanhuman

TSL 2 BASIC

Gene LINC00643, Length 3,247 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-201ENST00000334389 AIPL1Q9NZN9 384 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 PRODH2Q9UF12 536 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 OPN4Q9UHM6 478 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 SUFUQ9UMX1 484 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 POLIQ9UNA4 740 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 BRWD1Q9NSI6 2320 aa1.39□□□□□ -2.19
LINC00643-201ENST00000334389 ARHGAP42A6NI28 874 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 LRRIQ4A6NIV6 560 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 NKX6-3A6NJ46 265 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 HACD1B0YJ81 288 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 E7ENQ6 273 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 H3BQF6 201 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 PES1O00541 588 aaKnown RBP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 LDLRAD4O15165 306 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 LEFTY1O75610 366 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 RP2O75695 350 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 KRT36O76013 467 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 CD8AP01732 235 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 IGHV4-39P01824 125 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 IGHMP01871 453 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 SSBP05455 408 aaKnown RBP eCLIP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 CDK11BP21127 795 aaKnown RBP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 FPR2P25090 351 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 TACR1P25103 407 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 ABCD3P28288 659 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 FMO4P31512 558 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 ETV3P41162 512 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 HALP42357 657 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 SPINT3P49223 89 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 PLIN5Q00G26 463 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 PAX5Q02548 391 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 LRRC63Q05C16 580 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 EFR3AQ14156 821 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 ZNF174Q15697 407 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 GTF2IRD2BQ6EKJ0 949 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 ABLIM2Q6H8Q1 611 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 CLEC2AQ6UVW9 174 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 SYT10Q6XYQ8 523 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 SLC16A12Q6ZSM3 486 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 PEG10Q86TG7 708 aaKnown RBP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 GTF2IRD2Q86UP8 949 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 MARCH9Q86YJ5 346 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 SFTPA2Q8IWL1 248 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 SFTPA1Q8IWL2 248 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 CNTN4Q8IWV2 1026 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 DRC7Q8IY82 874 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 SLC43A2Q8N370 569 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 GUF1Q8N442 669 aaKnown RBP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 CCDC150Q8NCX0 1101 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 OR2I1PQ8NGU4 316 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 LMO3Q8TAP4 145 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 MAIP1Q8WWC4 291 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 FBXW5Q969U6 566 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 ZBTB8AQ96BR9 441 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 DUS3LQ96G46 650 aaKnown RBP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 EPSTI1Q96J88 318 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 SCLT1Q96NL6 688 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 OR6C1Q96RD1 312 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 SLC38A3Q99624 504 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 PIGQQ9BRB3 760 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 CHODLQ9H9P2 273 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 LPAR2Q9HBW0 351 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 PCDH12Q9NPG4 1184 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 TMEM184CQ9NVA4 438 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 KLHL28Q9NXS3 571 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 RSPH14Q9UHP6 348 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 IPO11Q9UI26 975 aaKnown RBP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 NUP50Q9UKX7 468 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 NENFQ9UMX5 172 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 LUC7L2Q9Y383 392 aaKnown RBP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 DHRS7Q9Y394 339 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 MYO7AQ13402 2215 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 PCNX3Q9H6A9 2034 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 APC2O95996 2303 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 CCDC78A2IDD5 438 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 LRRD1A4D1F6 860 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 POM121BA6NF01 834 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 NUPR2A6NF83 97 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 LRRC3CA6NJW4 275 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 CLGNO14967 610 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 EIF3HO15372 352 aaKnown RBP eCLIP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 IGKV3-11P04433 115 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 TP53P04637 393 aaPredicted RBP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 THBDP07204 575 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 ACAA1P09110 424 aaPredicted RBP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 ESRRAP11474 423 aaPredicted RBP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 PCNAP12004 261 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 NAT1P18440 290 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 BUD31P41223 144 aaPredicted RBP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 UBA7P41226 1012 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 TMEM115Q12893 351 aaPredicted RBP1.38□□□□□ -2.19
LINC00643-201ENST00000334389 NPRL3Q12980 569 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 XRCC4Q13426 336 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 TRPC3Q13507 836 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 CDH18Q13634 790 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 RCN2Q14257 317 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 LLGL1Q15334 1064 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 ACER2Q5QJU3 275 aa1.38□□□□□ -2.19
LINC00643-201ENST00000334389 LRRC38Q5VT99 294 aa1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms