RNA–Protein interactions for RNA: ENST00000332853.8

VSTM4-202, Transcript of V-set and transmembrane domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSTM4, Length 6,392 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSTM4-202ENST00000332853 SAMD11Q96NU1 681 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 GPER1Q99527 375 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 GTPBP2Q9BX10 602 aaKnown RBP12.49□□□□□ -0.41
VSTM4-202ENST00000332853 LHX3Q9UBR4 397 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 J3QRK9 145 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 NNATQ16517 81 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 DUS1LQ6P1R4 473 aaKnown RBP12.49□□□□□ -0.41
VSTM4-202ENST00000332853 GKN2Q86XP6 184 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 FBXL8Q96CD0 374 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 NDC1Q9BTX1 674 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 BCL2L14Q9BZR8 327 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 DCSTAMPQ9H295 470 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 CDH7Q9ULB5 785 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 WDR45Q9Y484 360 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 IRAK3Q9Y616 596 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 APOL3O95236 402 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 ARFIP1P53367 373 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 ST3GAL3Q11203 375 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 ARHGAP40Q5TG30 622 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 MLIPQ5VWP3 458 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 ASPGQ86U10 573 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 CNTN4Q8IWV2 1026 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 GATSQ8NAP1 163 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 NETO1Q8TDF5 533 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 KLHL6Q8WZ60 621 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 UTP4Q969X6 686 aaKnown RBP12.49□□□□□ -0.41
VSTM4-202ENST00000332853 PEX16Q9Y5Y5 336 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 ZNF3P17036 446 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 HOXD9P28356 352 aaPredicted RBP12.49□□□□□ -0.41
VSTM4-202ENST00000332853 RORCP51449 518 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 KLHL36Q8N4N3 616 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 LRRC17Q8N6Y2 441 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 OR4K14Q8NGD5 310 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 GFM1Q96RP9 751 aaKnown RBP12.49□□□□□ -0.41
VSTM4-202ENST00000332853 BARD1Q99728 777 aaKnown RBP12.49□□□□□ -0.41
VSTM4-202ENST00000332853 DOHHQ9BU89 302 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 TSSK6Q9BXA6 273 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 CKLFQ9UBR5 152 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 HCN4Q9Y3Q4 1203 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 FABP12A6NFH5 140 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 FAM25EA8MYX2 175 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 CCKBRP32239 447 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 ZNF267Q14586 743 aaPredicted RBP12.49□□□□□ -0.41
VSTM4-202ENST00000332853 NUP43Q8NFH3 380 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 RNASE11Q8TAA1 199 aaKnown RBP12.49□□□□□ -0.41
VSTM4-202ENST00000332853 PHOSPHO1Q8TCT1 267 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 NRG4Q8WWG1 115 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 OR5P2Q8WZ92 322 aa12.49□□□□□ -0.41
VSTM4-202ENST00000332853 MMABQ96EY8 250 aaPredicted RBP12.49□□□□□ -0.41
VSTM4-202ENST00000332853 SORBS1Q9BX66 1292 aaKnown RBP12.49□□□□□ -0.41
VSTM4-202ENST00000332853 AGR2O95994 175 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 RLN1P04808 185 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 RPS3P23396 243 aaKnown RBP eCLIP12.48□□□□□ -0.41
VSTM4-202ENST00000332853 CCR7P32248 378 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 KDELR2P33947 212 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 GNALP38405 381 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 AMIGO1Q86WK6 493 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 NRROSQ86YC3 692 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 TRPV5Q9NQA5 729 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 ABCB7O75027 752 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 CXCR1P25024 350 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 GALNT1Q10472 559 aaPredicted RBP12.48□□□□□ -0.41
VSTM4-202ENST00000332853 TCEAL5Q5H9L2 206 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 FAM26DQ5JW98 314 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 ZNF773Q6PK81 442 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 HACD2Q6Y1H2 254 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 GALNT15Q8N3T1 639 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 YTHDF1Q9BYJ9 559 aaKnown RBP12.48□□□□□ -0.41
VSTM4-202ENST00000332853 SCDO00767 359 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 RPP14O95059 124 aaKnown RBP12.48□□□□□ -0.41
VSTM4-202ENST00000332853 GGT1P19440 569 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 KCNC1P48547 511 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 DNASE1L1P49184 302 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 OGFRL1Q5TC84 451 aaPredicted RBP12.48□□□□□ -0.41
VSTM4-202ENST00000332853 PLET1Q6UQ28 207 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 RFLNAQ6ZTI6 216 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 SHKBP1Q8TBC3 707 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 C16orf78Q8WTQ4 265 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 NKD1Q969G9 470 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 SLC17A9Q9BYT1 436 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 UBE2QL1A1L167 161 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 C2orf74A8MZ97 194 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 COQ9O75208 318 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 CCNKO75909 580 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 GPX3P22352 226 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 ERVFC1P60507 584 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 GSTM4Q03013 218 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 SLC3A1Q07837 685 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 LCN1P1Q5VSP4 162 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 OR4C11Q6IEV9 310 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 XKR5Q6UX68 686 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 KBTBD6Q86V97 674 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.48□□□□□ -0.41
VSTM4-202ENST00000332853 NT5C3BQ969T7 300 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 MAPKAP1Q9BPZ7 522 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 SMOXQ9NWM0 555 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 ERVK-11Q9UQG0 969 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 A0A1W2PPW3 197 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 SLC22A1O15245 554 aa12.48□□□□□ -0.41
VSTM4-202ENST00000332853 CLPXO76031 633 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms