RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 HNRNPA0Q13151 305 aaKnown RBP17.42■□□□□ 0.38
PKP3-201ENST00000331563 LARS2Q15031 903 aaKnown RBP17.42■□□□□ 0.38
PKP3-201ENST00000331563 TOR1AIP1Q5JTV8 583 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 PIANPQ8IYJ0 282 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 GDPD1Q8N9F7 314 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.42■□□□□ 0.384e-9■■■■■ 34.2
PKP3-201ENST00000331563 TMEM184CQ9NVA4 438 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 ELF5Q9UKW6 265 aaPredicted RBP17.42■□□□□ 0.38
PKP3-201ENST00000331563 SCML1Q9UN30 329 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 MYL12BO14950 172 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 CPSF4O95639 269 aaKnown RBP17.42■□□□□ 0.38
PKP3-201ENST00000331563 MYL12AP19105 171 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 HTR7P34969 479 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 SLC11A1P49279 550 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 INPP1P49441 399 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 PPIGQ13427 754 aaKnown RBP eCLIP17.42■□□□□ 0.382e-7■■□□□ 13.4
PKP3-201ENST00000331563 PCBP2Q15366 365 aaKnown RBP eCLIP17.42■□□□□ 0.382e-6■■■■■ 28.8
PKP3-201ENST00000331563 CPSF6Q16630 551 aaKnown RBP eCLIP17.42■□□□□ 0.38
PKP3-201ENST00000331563 RTP2Q5QGT7 225 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 PSAPL1Q6NUJ1 521 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 ZNF600Q6ZNG1 722 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 CBLL1Q75N03 491 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 SERPINA11Q86U17 422 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 TRIM69Q86WT6 500 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 TAGAPQ8N103 731 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 SPNS1Q9H2V7 528 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 WWOXQ9NZC7 414 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 SSR3Q9UNL2 185 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 PTPRDP23468 1912 aa17.42■□□□□ 0.38
PKP3-201ENST00000331563 ZNF98A6NK75 572 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 SUV39H1O43463 412 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 KCNK5O95279 499 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 HOXB3P14651 431 aaPredicted RBP17.41■□□□□ 0.38
PKP3-201ENST00000331563 HAAOP46952 286 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 DGKEP52429 567 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 PER3P56645 1201 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 EFEMP1Q12805 493 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 GLYR1Q49A26 553 aaPredicted RBP17.41■□□□□ 0.38
PKP3-201ENST00000331563 LRRC66Q68CR7 880 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 MZT2BQ6NZ67 158 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 ZNF782Q6ZMW2 699 aaPredicted RBP17.41■□□□□ 0.38
PKP3-201ENST00000331563 PTCHD4Q6ZW05 846 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 GPAT4Q86UL3 456 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 SLAIN1Q8ND83 568 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 ATP6V1C2Q8NEY4 427 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 PCNPQ8WW12 178 aaKnown RBP17.41■□□□□ 0.38
PKP3-201ENST00000331563 WDFY2Q96P53 400 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 NIPSNAP1Q9BPW8 284 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 BPIFA1Q9NP55 256 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 MYO7AQ13402 2215 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 TRIM3O75382 744 aaPredicted RBP17.41■□□□□ 0.38
PKP3-201ENST00000331563 ADRA2AP08913 450 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 TYMPP19971 482 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 TNFRSF1BP20333 461 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 MAN2A2P49641 1150 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 CDH12P55289 794 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 CDC42P60953 191 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 TTLL9Q3SXZ7 439 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 ALFQ53S48 1182 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 DDI2Q5TDH0 399 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 TEX261Q6UWH6 196 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 CDC26Q8NHZ8 85 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 GTPBP3Q969Y2 492 aaKnown RBP17.41■□□□□ 0.38
PKP3-201ENST00000331563 CASD1Q96PB1 797 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 SLC6A17Q9H1V8 727 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 HHATLQ9HCP6 504 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 IFT46Q9NQC8 304 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 SLC35C2Q9NQQ7 365 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 ABCC13Q9NSE7 274 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 CLN6Q9NWW5 311 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 TAS2R7Q9NYW3 318 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 U3KQ87 197 aa17.41■□□□□ 0.38
PKP3-201ENST00000331563 FPGTO14772 594 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 FKTNO75072 461 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 OAZ2O95190 189 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 SLC2A2P11168 524 aaPredicted RBP17.4■□□□□ 0.38
PKP3-201ENST00000331563 SPIBQ01892 262 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 DUSP4Q13115 394 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 DOC2BQ14184 412 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 EEF1AKMT2Q5JPI9 291 aaKnown RBP17.4■□□□□ 0.38
PKP3-201ENST00000331563 PLAG1Q6DJT9 500 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 LIPIQ6XZB0 460 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 CFAP77Q6ZQR2 320 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 SLC37A3Q8NCC5 494 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 ZNF680Q8NEM1 530 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 OR52H1Q8NGJ2 320 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 HYLS1Q96M11 299 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 SMIM14Q96QK8 99 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 CDCA4Q9BXL8 241 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 NLE1Q9NVX2 485 aaPredicted RBP17.4■□□□□ 0.38
PKP3-201ENST00000331563 TMEM161AQ9NX61 479 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 LRFN2Q9ULH4 789 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 CSNK1G3Q9Y6M4 447 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 ADAM12O43184 909 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 CCNB2O95067 398 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 TACR1P25103 407 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 POU4F3Q15319 338 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.4■□□□□ 0.38
PKP3-201ENST00000331563 FLYWCH1Q4VC44 716 aa17.4■□□□□ 0.38
PKP3-201ENST00000331563 CTSL3PQ5NE16 218 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms