RNA–Protein interactions for RNA: ENST00000330295.9

CTHRC1-201, Transcript of collagen triple helix repeat containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTHRC1, Length 1,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-201ENST00000330295 C6orf203Q9P0P8 240 aaPredicted RBP13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 PYCARDQ9ULZ3 195 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 ERVK-11Q9UQG0 969 aa13.67□□□□□ -0.22
CTHRC1-201ENST00000330295 EML6Q6ZMW3 1958 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 TRGV5A0A0B4J1U4 118 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 KDM4EB2RXH2 506 aaPredicted RBP13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 HCN1O60741 890 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 GOT2P00505 430 aaKnown RBP13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 IL2RAP01589 272 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 MLNP12872 115 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 THBS2P35442 1172 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 BCL6P41182 706 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 MAGEA6P43360 314 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 TTPAP49638 278 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 TERF1P54274 439 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 ACVR1Q04771 509 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 HSPA14Q0VDF9 509 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 SLC10A1Q14973 349 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 TTC23LQ6PF05 361 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 PACS1Q6VY07 963 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 ABHD13Q7L211 337 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 MPP5Q8N3R9 675 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 MCUQ8NE86 351 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 OR13J1Q8NGT2 312 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 RAD51AP1Q96B01 352 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 RBCK1Q9BYM8 510 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 REG4Q9BYZ8 158 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 EPB41L4BQ9H329 900 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 IL1RL2Q9HB29 575 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 MRPS30Q9NP92 439 aaKnown RBP13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 CHRAC1Q9NRG0 131 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 LANCL2Q9NS86 450 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 CATSPERZQ9NTU4 200 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 ASIC3Q9UHC3 531 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 HEATR5AQ86XA9 2040 aa13.66□□□□□ -0.22
CTHRC1-201ENST00000330295 IGKV1-8A0A0C4DH67 115 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 KRT87PA6NCN2 255 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 SDR42E2A6NKP2 422 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 G3V3Y1 287 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 SGK494L7N484 410 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 SIAH2O43255 324 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 EPPINO95925 133 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 PKMP14618 531 aaKnown RBP13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 EZRP15311 586 aaKnown RBP13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 IL1RNP18510 177 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 MGAT1P26572 445 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 CCR7P32248 378 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 FOXN2P32314 431 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 SSR4P51571 173 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 AGFG1P52594 562 aaKnown RBP13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 ATP5J2P56134 94 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 VEZF1Q14119 521 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 ACSF3Q4G176 576 aaPredicted RBP13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 MRNIPQ6NTE8 343 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 SYDE1Q6ZW31 735 aaPredicted RBP13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 LACC1Q8IV20 430 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 PPIL6Q8IXY8 311 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 GABPB2Q8TAK5 448 aaPredicted RBP13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 GSDMBQ8TAX9 411 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 KIFC1Q9BW19 673 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 ZNF701Q9NV72 531 aaPredicted RBP13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 SLC2A6Q9UGQ3 507 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 NFS1Q9Y697 457 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 NOTCH1P46531 2555 aa13.65□□□□□ -0.22
CTHRC1-201ENST00000330295 ROS1P08922 2347 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 DYSFO75923 2080 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 SAGE2PA6NJ88 616 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 A8MVJ9 347 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 DEFB108AA8MXU0 73 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 CCDC188H7C350 402 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 CD3EAPO15446 510 aaKnown RBP13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 GPC4O75487 556 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 NDUFS3O75489 264 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 CASQ1P31415 396 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 KCNJ11Q14654 390 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 CCSMST1Q4G0I0 132 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 PDLIM3Q53GG5 364 aaPredicted RBP13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 ZNF425Q6IV72 752 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 LRRC6Q86X45 466 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 CYP4X1Q8N118 509 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 NFAM1Q8NET5 270 aaPredicted RBP13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 ASZ1Q8WWH4 475 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 IGFBPL1Q8WX77 278 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 ZBED6CLQ96FA7 236 aaPredicted RBP13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 FAM173AQ9BQD7 235 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 RBM24Q9BX46 236 aaKnown RBP13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 HPF1Q9NWY4 346 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 GALNT8Q9NY28 637 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 UTP6Q9NYH9 597 aaKnown RBP13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 PCYOX1Q9UHG3 505 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 SOX13Q9UN79 622 aa13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.64□□□□□ -0.23
CTHRC1-201ENST00000330295 A0A0G2JK05 382 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 TRBV11-1A0A0K0K1C0 115 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 OR51F1A6NGY5 319 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 PRMT5O14744 637 aaPredicted RBP13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 VAPBO95292 243 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 IL10P22301 178 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 SOX18P35713 384 aa13.63□□□□□ -0.23
CTHRC1-201ENST00000330295 BDKRB1P46663 353 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms