RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 GALNT8Q9NY28 637 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 THAP10Q9P2Z0 257 aaPredicted RBP13.91□□□□□ -0.18
TPM3-206ENST00000330188 CFAP20Q9Y6A4 193 aaKnown RBP13.91□□□□□ -0.18
TPM3-206ENST00000330188 IGLON5A6NGN9 336 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 RGS10O43665 173 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 GABARAPO95166 117 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 KRT75O95678 551 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 BMXP51813 675 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 SPIBQ01892 262 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 ARHGAP19Q14CB8 494 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 ADGRF3Q8IZF5 1079 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 ANKRD53Q8N9V6 530 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 LZICQ8WZA0 190 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 MENTQ9BUN1 341 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 CXorf36Q9H7Y0 433 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 CCNB1IP1Q9NPC3 277 aa13.91□□□□□ -0.18
TPM3-206ENST00000330188 KLHL33A6NCF5 533 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 RTCAO00442 366 aaKnown RBP13.9□□□□□ -0.18
TPM3-206ENST00000330188 MRPS14O60783 128 aaKnown RBP13.9□□□□□ -0.18
TPM3-206ENST00000330188 UQCRC2P22695 453 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 FCARP24071 287 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 DRD3P35462 400 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 PCBP3P57721 371 aaKnown RBP13.9□□□□□ -0.18
TPM3-206ENST00000330188 CYP4F2P78329 520 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 PDGFRLQ15198 375 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 WSCD2Q2TBF2 565 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 SYT6Q5T7P8 510 aaPredicted RBP13.9□□□□□ -0.18
TPM3-206ENST00000330188 DEPDC1Q5TB30 811 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 KHDRBS2Q5VWX1 349 aaKnown RBP13.9□□□□□ -0.18
TPM3-206ENST00000330188 METRNLQ641Q3 311 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 GPR153Q6NV75 609 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 FAM180BQ6P0A1 224 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 Q6ZPB1 254 aaPredicted RBP13.9□□□□□ -0.18
TPM3-206ENST00000330188 SLC5A8Q8N695 610 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 OR10G2Q8NGC3 310 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 YIPF6Q96EC8 236 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 SIGLEC11Q96RL6 698 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 MS4A8Q9BY19 250 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 WASH6PQ9NQA3 447 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 TBC1D23Q9NUY8 699 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 AHSPQ9NZD4 102 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 RNF6Q9Y252 685 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 DGKBQ9Y6T7 804 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 TRPM6Q9BX84 2022 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 ANKDD1BA6NHY2 528 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 J3KTA2 159 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 SEMA3DO95025 777 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 ZBTB11O95625 1053 aaPredicted RBP13.9□□□□□ -0.18
TPM3-206ENST00000330188 DDCP20711 480 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 PSMB5P28074 263 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 BSGP35613 385 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 PXNP49023 591 aaPredicted RBP13.9□□□□□ -0.18
TPM3-206ENST00000330188 CDH12P55289 794 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 C21orf59P57076 290 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 TAS2R38P59533 333 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 TMED1Q13445 227 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 GPM6BQ13491 265 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 CLCA4Q14CN2 919 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 CYP27C1Q4G0S4 372 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 EGFLAMQ63HQ2 1017 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 CCDC81Q6ZN84 652 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 GET4Q7L5D6 327 aaPredicted RBP13.9□□□□□ -0.18
TPM3-206ENST00000330188 PRSS48Q7RTY5 328 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 SVOPQ8N4V2 548 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 OR52J3Q8NH60 311 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 IPCEF1Q8WWN9 437 aaPredicted RBP13.9□□□□□ -0.18
TPM3-206ENST00000330188 DNASE1L2Q92874 299 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 F2RL3Q96RI0 385 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 BCL7BQ9BQE9 202 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 AIF1LQ9BQI0 150 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 ACOT13Q9NPJ3 140 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 SLAMF7Q9NQ25 335 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 RLIMQ9NVW2 624 aa13.9□□□□□ -0.18
TPM3-206ENST00000330188 PRAMEF33A0A0G2JMD5 474 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 A0A1W2PPV9 198 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 MAGEB3O15480 346 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 PRAMEF10O60809 474 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 FADS2O95864 444 aaKnown RBP13.89□□□□□ -0.19
TPM3-206ENST00000330188 VIPP01282 170 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 RPN2P04844 631 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 ITGA2P17301 1181 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 GGT2P36268 569 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 DSTNP60981 165 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 REEP5Q00765 189 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 MVKQ03426 396 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 MICAQ29983 383 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 EXOC3L2Q2M3D2 409 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 AGBL4Q5VU57 503 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 FAM46CQ5VWP2 391 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 TANGO2Q6ICL3 276 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 DUS1LQ6P1R4 473 aaKnown RBP13.89□□□□□ -0.19
TPM3-206ENST00000330188 VITQ6UXI7 678 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 CACUL1Q86Y37 369 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 DRAXINQ8NBI3 349 aaPredicted RBP13.89□□□□□ -0.19
TPM3-206ENST00000330188 ABHD11Q8NFV4 315 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 GEMIN6Q8WXD5 167 aaKnown RBP13.89□□□□□ -0.19
TPM3-206ENST00000330188 TM4SF18Q96CE8 201 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 PLEKHA8Q96JA3 519 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 NLNQ9BYT8 704 aa13.89□□□□□ -0.19
TPM3-206ENST00000330188 OBP2AQ9NY56 170 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms