RNA–Protein interactions for RNA: ENST00000329516.7

RGPD6-201, Transcript of RANBP2-like and GRIP domain containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD6, Length 7,165 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD6-201ENST00000329516 OGTO15294 1046 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 HOXA3O43365 443 aaPredicted RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 SMAD6O43541 496 aaKnown RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 DNAJB6O75190 326 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 SNAPC5O75971 98 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 MOCS2O96007 188 aaPredicted RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 NR1D1P20393 614 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 CAPN3P20807 821 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 HNF1AP20823 631 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 SSTR1P30872 391 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 EFNA5P52803 228 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 AIF1P55008 147 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 MRPS10P82664 201 aaKnown RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 AP1B1Q10567 949 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 TMED1Q13445 227 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 FASTKQ14296 549 aaKnown RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 RBM39Q14498 530 aaKnown RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 SSX2Q16385 188 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 ZNF792Q3KQV3 632 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 LIN52Q52LA3 116 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 PPM1JQ5JR12 505 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 PHF19Q5T6S3 580 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 SLC22A25Q6T423 547 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 SLC16A9Q7RTY1 509 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 SNX20Q7Z614 316 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 ZER1Q7Z7L7 766 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 ITIH5Q86UX2 942 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 ZDHHC13Q8IUH4 622 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 MCATQ8IVS2 390 aaKnown RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 ADHFE1Q8IWW8 467 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 CARFQ8N187 725 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 RNF175Q8N4F7 328 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 TEX26Q8N6G2 289 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 VANGL1Q8TAA9 524 aaPredicted RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 FAM76AQ8TAV0 307 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 RIT2Q99578 217 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 URM1Q9BTM9 101 aaKnown RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 RBM24Q9BX46 236 aaKnown RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 FXYD6Q9H0Q3 95 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 FAM124BQ9H5Z6 455 aaPredicted RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 GAREM1Q9H706 876 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 UNKLQ9H9P5 680 aaKnown RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 LRRC4Q9HBW1 653 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 VAT1LQ9HCJ6 419 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 SPANXA1Q9NS26 97 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 RNF146Q9NTX7 359 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 C20orf96Q9NUD7 363 aaPredicted RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 PIGVQ9NUD9 493 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 DDX18Q9NVP1 670 aaKnown RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 TINAGQ9UJW2 476 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 IKZF2Q9UKS7 526 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 CLCA2Q9UQC9 943 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 CAMK2AQ9UQM7 478 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 PCDHGB3Q9Y5G1 929 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 PCDHGB1Q9Y5G3 927 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 SNX10Q9Y5X0 201 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 FAM237BA0A1B0GVD1 139 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 LIN7AO14910 233 aaPredicted RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 MDM4O15151 490 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 TSPAN6O43657 245 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 AKAP8O43823 692 aaKnown RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 PIP5K1CO60331 668 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 ICAM1P05362 532 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 QDPRP09417 244 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 GSTM3P21266 225 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 GNRHRP30968 328 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 GPC1P35052 558 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 SOX3P41225 446 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 SOX9P48436 509 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 RASSF2P50749 326 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 AKR1D1P51857 326 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 ERVFC1-1P60608 527 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 SH3BP2P78314 561 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 SPEM2Q0P670 501 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 ZNF155Q12901 538 aaPredicted RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 CSTF3Q12996 717 aaKnown RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 PLD1Q13393 1074 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 IKBKEQ14164 716 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 PDK4Q16654 411 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 AASDHQ4L235 1098 aaPredicted RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 PRAMEF18Q5VWM3 479 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 PLPP4Q5VZY2 271 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 FDX2Q6P4F2 183 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 NEK10Q6ZWH5 1172 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 ARMCX2Q7L311 632 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 TMCO2Q7Z6W1 182 aaPredicted RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 CDH24Q86UP0 819 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 PTRH1Q86Y79 214 aaKnown RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 LURAP1LQ8IV03 231 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 SPARTQ8N0X7 666 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 ZFP82Q8N141 532 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 ZNF557Q8N988 423 aaPredicted RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 OR52N5Q8NH56 324 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 SCLYQ96I15 445 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 FUBP3Q96I24 572 aaKnown RBP eCLIP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 FAR2Q96K12 515 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 TBATAQ96M53 351 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 RBM14Q96PK6 669 aaKnown RBP2.49□□□□□ -2.01
RGPD6-201ENST00000329516 NPY6RQ99463 290 aa2.49□□□□□ -2.01
RGPD6-201ENST00000329516 PIP5K1AQ99755 562 aa2.49□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms