RNA–Protein interactions for RNA: ENST00000328560.12

ATP2C1-201, Transcript of ATPase secretory pathway Ca2+ transporting 1, humanhuman

TSL 1 (best) BASIC

Gene ATP2C1, Length 3,484 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2C1-201ENST00000328560 RAB8BQ92930 207 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 ZSWIM3Q96MP5 696 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 VPS35Q96QK1 796 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 EXOSC4Q9NPD3 245 aaKnown RBP13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 GULP1Q9UBP9 304 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 MMP20O60882 483 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 LILRB3O75022 631 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 SOX14O95416 240 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 FURINP09958 794 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 FEN1P39748 380 aaKnown RBP13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 PRSS53Q2L4Q9 553 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 LEXMQ3ZCV2 418 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 TECPR1Q7Z6L1 1165 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 GABARAPL3Q9BY60 117 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 BHLHE41Q9C0J9 482 aaPredicted RBP13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 C11orf16Q9NQ32 467 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 INIPQ9NRY2 104 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 ZNF226Q9NYT6 803 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 TAS2R9Q9NYW1 312 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 POFUT2Q9Y2G5 429 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 TMEM98Q9Y2Y6 226 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 INSL6Q9Y581 213 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 A0A0G2JN53 185 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 C5orf58C9J3I9 102 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 SLC9A3R1O14745 358 aaPredicted RBP13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 TNFRSF21O75509 655 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 POP7O75817 140 aaKnown RBP13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 SERPIND1P05546 499 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 CDK1P06493 297 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 ALOX12P18054 663 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 DDX6P26196 483 aaKnown RBP eCLIP13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 SERPINB1P30740 379 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 DCDC1P59894 354 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 ERVFC1P60507 584 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 PLEKHG7Q6ZR37 379 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 HEATR4Q86WZ0 1026 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 VANGL1Q8TAA9 524 aaPredicted RBP13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 SLC5A11Q8WWX8 675 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 BCL7BQ9BQE9 202 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 FBXO8Q9NRD0 319 aa13.44□□□□□ -0.26
ATP2C1-201ENST00000328560 WASH3PC4AMC7 463 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 CNOT3O75175 753 aaKnown RBP13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 CD40LGP29965 261 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 TAP2Q03519 686 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 ZNF33BQ06732 778 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 DUSP7Q16829 419 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 SPDYE7PQ495Y7 208 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 LILRA6Q6PI73 481 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 PTCHD4Q6ZW05 846 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 C11orf96Q7Z7L8 435 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 HMGN2P46Q86SG4 172 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 GPR65Q8IYL9 337 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 OR9A1PQ8NGU1 263 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 MRGPRX3Q96LB0 322 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 CENPOQ9BU64 300 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 SLC6A16Q9GZN6 736 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 CCDC177Q9NQR7 707 aaPredicted RBP13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 CAB39Q9Y376 341 aaPredicted RBP13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 MRPS23Q9Y3D9 190 aaKnown RBP13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 PCDHGA2Q9Y5H1 932 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 PLXNB3Q9ULL4 1909 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 GPR37L1O60883 481 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 S100A5P33763 92 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 MMP12P39900 470 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 HSPB3Q12988 150 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 TCEAL5Q5H9L2 206 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 UBE2UQ5VVX9 321 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 DPPA4Q7L190 304 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 EFCAB11Q9BUY7 163 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 BTBD2Q9BX70 525 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 EHD1Q9H4M9 534 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 DYRK4Q9NR20 520 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 C1GALT1Q9NS00 363 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 OSGIN1Q9UJX0 560 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 CLDN24A6NM45 220 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 CCNB2O95067 398 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 RPLP0P05388 317 aaKnown RBP13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 BCHEP06276 602 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 ADORA3P0DMS8 318 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 ITGA2P17301 1181 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 ITGB8P26012 769 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 CSNK2BP67870 215 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 MESP2Q0VG99 397 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 PTGES3Q15185 160 aaKnown RBP13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 C10orf62Q5T681 223 aaPredicted RBP13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 CEACAM20Q6UY09 585 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 DEPDC4Q8N2C3 294 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 AMER2Q8N7J2 671 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 B3GNT7Q8NFL0 401 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 FCGR1BQ92637 280 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 SPATA9Q9BWV2 254 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 NLNQ9BYT8 704 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 ABCG4Q9H172 646 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 RERGLQ9H628 205 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 ATP6V1HQ9UI12 483 aa13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 RBMX2Q9Y388 322 aaKnown RBP13.43□□□□□ -0.26
ATP2C1-201ENST00000328560 FGBP02675 491 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 DGKGP49619 791 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 PPP5CP53041 499 aa13.42□□□□□ -0.26
ATP2C1-201ENST00000328560 NXPE4Q6UWF7 544 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms