RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 TRIM60Q495X7 471 aa16.03■□□□□ 0.16
SSH1-201ENST00000326470 CRB2Q5IJ48 1285 aa16.03■□□□□ 0.16
SSH1-201ENST00000326470 ZNF648Q5T619 568 aaPredicted RBP16.03■□□□□ 0.16
SSH1-201ENST00000326470 RETSATQ6NUM9 610 aa16.03■□□□□ 0.16
SSH1-201ENST00000326470 THOC6Q86W42 341 aaKnown RBP16.03■□□□□ 0.16
SSH1-201ENST00000326470 LAS2Q8IYD9 372 aa16.03■□□□□ 0.16
SSH1-201ENST00000326470 TRIM63Q969Q1 353 aa16.03■□□□□ 0.16
SSH1-201ENST00000326470 TRMT61AQ96FX7 289 aaKnown RBP16.03■□□□□ 0.16
SSH1-201ENST00000326470 BHLHE41Q9C0J9 482 aaPredicted RBP16.03■□□□□ 0.16
SSH1-201ENST00000326470 RANGRFQ9HD47 186 aaPredicted RBP16.03■□□□□ 0.16
SSH1-201ENST00000326470 CLEC2DQ9UHP7 191 aa16.03■□□□□ 0.16
SSH1-201ENST00000326470 ENPP4Q9Y6X5 453 aa16.03■□□□□ 0.16
SSH1-201ENST00000326470 PRAMEF33A0A0G2JMD5 474 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 CCDC182A6NF36 153 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 PRAMEF10O60809 474 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 ADAMTS4O75173 837 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 CSO75390 466 aaKnown RBP16.02■□□□□ 0.16
SSH1-201ENST00000326470 CKMT1AP12532 417 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 HMGA1P17096 107 aaKnown RBP16.02■□□□□ 0.16
SSH1-201ENST00000326470 EEF1A2Q05639 463 aaKnown RBP16.02■□□□□ 0.16
SSH1-201ENST00000326470 GANABQ14697 944 aaKnown RBP16.02■□□□□ 0.16
SSH1-201ENST00000326470 KCNA10Q16322 511 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 GLYR1Q49A26 553 aaPredicted RBP16.02■□□□□ 0.16
SSH1-201ENST00000326470 ZNF385BQ569K4 471 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 DGKKQ5KSL6 1271 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 MEDAGQ5VYS4 303 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 MFSD14CQ5VZR4 134 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 GRHL2Q6ISB3 625 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 RDH10Q8IZV5 341 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 APCDD1Q8J025 514 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 HJURPQ8NCD3 748 aaPredicted RBP16.02■□□□□ 0.16
SSH1-201ENST00000326470 ASIC4Q96FT7 647 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 RIPOR3Q96MK2 946 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 C2orf49Q9BVC5 232 aaPredicted RBP16.02■□□□□ 0.16
SSH1-201ENST00000326470 C1GALT1Q9NS00 363 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 WDR70Q9NW82 654 aa16.02■□□□□ 0.16
SSH1-201ENST00000326470 NUFIP1Q9UHK0 495 aaKnown RBP16.02■□□□□ 0.16
SSH1-201ENST00000326470 EXO1Q9UQ84 846 aaKnown RBP16.02■□□□□ 0.16
SSH1-201ENST00000326470 ALPK3Q96L96 1907 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 HYKKA2RU49 373 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 FADS2P1A8MWK0 482 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 SH3BGRLO75368 114 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 IFNA14P01570 189 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 CYP17A1P05093 508 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 RHCEP18577 417 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 POU1F1P28069 291 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 TM4SF4P48230 202 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 SNRPGP62308 76 aaKnown RBP16.02■□□□□ 0.15
SSH1-201ENST00000326470 NKX3-2P78367 333 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 CDK6Q00534 326 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 LARS2Q15031 903 aaKnown RBP16.02■□□□□ 0.15
SSH1-201ENST00000326470 CCDC58Q4VC31 144 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 Q5BKY6 102 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 ZNF770Q6IQ21 691 aaPredicted RBP16.02■□□□□ 0.15
SSH1-201ENST00000326470 PRSS55Q6UWB4 352 aaPredicted RBP16.02■□□□□ 0.15
SSH1-201ENST00000326470 TPRG1Q6ZUI0 275 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 SLC34A3Q8N130 599 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 VWA5B2Q8N398 1253 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 KLHL6Q8WZ60 621 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 CXorf40BQ96DE9 158 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 TMEM80Q96HE8 168 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 ZFYVE19Q96K21 471 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 FYTTD1Q96QD9 318 aaKnown RBP16.02■□□□□ 0.15
SSH1-201ENST00000326470 SLC35A5Q9BS91 424 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 NMNAT1Q9HAN9 279 aaPredicted RBP16.02■□□□□ 0.15
SSH1-201ENST00000326470 SGK2Q9HBY8 427 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 NDUFB11Q9NX14 153 aa16.02■□□□□ 0.15
SSH1-201ENST00000326470 DSPPQ9NZW4 1301 aa16.01■□□□□ 0.15
SSH1-201ENST00000326470 ADAM12O43184 909 aa16.01■□□□□ 0.15
SSH1-201ENST00000326470 SEC14L5O43304 696 aa16.01■□□□□ 0.15
SSH1-201ENST00000326470 ALPPP05187 535 aa16.01■□□□□ 0.15
SSH1-201ENST00000326470 TGM4P49221 684 aa16.01■□□□□ 0.15
SSH1-201ENST00000326470 TUFMP49411 452 aaKnown RBP16.01■□□□□ 0.15
SSH1-201ENST00000326470 NCF4Q15080 339 aa16.01■□□□□ 0.15
SSH1-201ENST00000326470 SPIN4Q56A73 249 aa16.01■□□□□ 0.15
SSH1-201ENST00000326470 ADNP2Q6IQ32 1131 aa16.01■□□□□ 0.15
SSH1-201ENST00000326470 RFLNAQ6ZTI6 216 aa16.01■□□□□ 0.15
SSH1-201ENST00000326470 CCDC149Q6ZUS6 474 aa16.01■□□□□ 0.15
SSH1-201ENST00000326470 OR4K1Q8NGD4 311 aa16.01■□□□□ 0.15
SSH1-201ENST00000326470 CLP1Q92989 425 aaKnown RBP16.01■□□□□ 0.15
SSH1-201ENST00000326470 IL4I1Q96RQ9 567 aa16.01■□□□□ 0.15
SSH1-201ENST00000326470 ATP6V1HQ9UI12 483 aa16.01■□□□□ 0.15
SSH1-201ENST00000326470 GNG14A0A1W2PPG7 69 aa16■□□□□ 0.15
SSH1-201ENST00000326470 A0A1W2PQ67 120 aa16■□□□□ 0.15
SSH1-201ENST00000326470 TLR4O00206 839 aa16■□□□□ 0.15
SSH1-201ENST00000326470 SERPINA4P29622 427 aa16■□□□□ 0.15
SSH1-201ENST00000326470 TIA1P31483 386 aaKnown RBP eCLIP16■□□□□ 0.15
SSH1-201ENST00000326470 MLLT3P42568 568 aaPredicted RBP16■□□□□ 0.15
SSH1-201ENST00000326470 SLC11A1P49279 550 aa16■□□□□ 0.15
SSH1-201ENST00000326470 PTSQ03393 145 aa16■□□□□ 0.15
SSH1-201ENST00000326470 XKRXQ6PP77 449 aa16■□□□□ 0.15
SSH1-201ENST00000326470 FAM131AQ6UXB0 335 aa16■□□□□ 0.15
SSH1-201ENST00000326470 SERPINA13PQ6UXR4 307 aa16■□□□□ 0.15
SSH1-201ENST00000326470 TAS1R1Q7RTX1 841 aa16■□□□□ 0.15
SSH1-201ENST00000326470 RASGRP3Q8IV61 690 aa16■□□□□ 0.15
SSH1-201ENST00000326470 OXR1Q8N573 874 aa16■□□□□ 0.15
SSH1-201ENST00000326470 SCRN2Q96FV2 425 aa16■□□□□ 0.15
SSH1-201ENST00000326470 DHRS1Q96LJ7 313 aa16■□□□□ 0.15
SSH1-201ENST00000326470 MND1Q9BWT6 205 aa16■□□□□ 0.15
SSH1-201ENST00000326470 SSR3Q9UNL2 185 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms