RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 GFYI3L273 518 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 M0R082 166 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 SLC28A2O43868 658 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 ERAL1O75616 437 aaKnown RBP12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 IGHA2P01877 340 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 HOXD12P35452 270 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 EIF2DP41214 584 aaKnown RBP12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 TEAD2Q15562 447 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 METTL2BQ6P1Q9 378 aaKnown RBP12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 KLHL17Q6TDP4 642 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 ARMCX6Q7L4S7 300 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 FAM124AQ86V42 546 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 LYSMD2Q8IV50 215 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 PARP16Q8N5Y8 322 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 IQCF1Q8N6M8 205 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 KREMEN2Q8NCW0 462 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 GEMIN6Q8WXD5 167 aaKnown RBP12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 SIAEQ9HAT2 523 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 ABCB9Q9NP78 766 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 TIGARQ9NQ88 270 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 SEMA3GQ9NS98 782 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 ERVW-1Q9UQF0 538 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 SH2B3Q9UQQ2 575 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 A6NL46 340 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 WWP2O00308 870 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 MYL12BO14950 172 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 SNX4O95219 450 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 OXSR1O95747 527 aaPredicted RBP12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 RGS6P49758 472 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 DSTNP60981 165 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 NTHL1P78549 312 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 TARDBPQ13148 414 aaKnown RBP eCLIP12.34□□□□□ -0.432e-13■■□□□ 11.6
HMGCS1-201ENST00000325110 LHX8Q68G74 356 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 Q6ZNB5 142 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 CYP4Z2PQ8N1L4 340 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 CELF2-AS1Q8N7Q2 184 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 TCEANCQ8N8B7 351 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 EPYCQ99645 322 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 CCDC177Q9NQR7 707 aaPredicted RBP12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 TMEM39AQ9NV64 488 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 TAS2R9Q9NYW1 312 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 DNMT3BQ9UBC3 853 aaKnown RBP12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 SEC14L3Q9UDX4 400 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 TMEM98Q9Y2Y6 226 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 TRIM64BA6NI03 449 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 GLOD5A6NK44 160 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 SPNP16150 400 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 TGM1P22735 817 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 PCGF2P35227 344 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 ATP6V1E1P36543 226 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 TGFBR2P37173 567 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 MAPK12P53778 367 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 TUBA1BP68363 451 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 MICAQ29983 383 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 PLPP4Q5VZY2 271 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 ZDHHC20Q5W0Z9 365 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 TUBA1AQ71U36 451 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 WDR20Q8TBZ3 569 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 BTN2A2Q8WVV5 523 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 POLR2J2Q9GZM3 115 aaKnown RBP12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 MALT1Q9UDY8 824 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 KLHL3Q9UH77 587 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 NAALAD2Q9Y3Q0 740 aa12.34□□□□□ -0.43
HMGCS1-201ENST00000325110 PIPSLA2A3N6 862 aa12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 NRG2O14511 850 aaPredicted RBP12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 KRT75O95678 551 aa12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 OLR1P78380 273 aa12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 NFE2L1Q14494 772 aa12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 DUSP7Q16829 419 aa12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 TIMM50Q3ZCQ8 353 aa12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 BRAT1Q6PJG6 821 aa12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 TCEAL8Q8IYN2 117 aa12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 UBASH3BQ8TF42 649 aa12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 ZSCAN5AQ9BUG6 496 aa12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 GABARAPL1Q9H0R8 117 aa12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 NMNAT1Q9HAN9 279 aaPredicted RBP12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 FBXO8Q9NRD0 319 aa12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 WDR37Q9Y2I8 494 aa12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 PCDHGB1Q9Y5G3 927 aa12.33□□□□□ -0.43
HMGCS1-201ENST00000325110 METTL15A6NJ78 407 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 SAGE2PA6NJ88 616 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 CLDN24A6NM45 220 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 ARHGEF15O94989 841 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 ZNF8P17098 575 aaPredicted RBP12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 TBCEQ15813 527 aaPredicted RBP12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 AGAP7PQ5VUJ5 663 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 FAHD1Q6P587 224 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 MSANTD1Q6ZTZ1 278 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 C16orf78Q8WTQ4 265 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 TIFAQ96CG3 184 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 ZFYVE19Q96K21 471 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 MAGEB10Q96LZ2 347 aaPredicted RBP12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 SPNS1Q9H2V7 528 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 DYRK4Q9NR20 520 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 TAC3Q9UHF0 121 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 TMEM221A6NGB7 291 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 TLR4O00206 839 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 AP2A2O94973 939 aa12.33□□□□□ -0.44
HMGCS1-201ENST00000325110 LATS1O95835 1130 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms