RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 SH3YL1Q96HL8 342 aaPredicted RBP15.85■□□□□ 0.13
CLIP4-201ENST00000320081 SEZ6LQ9BYH1 1024 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 UCK2Q9BZX2 261 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 P2RX2Q9UBL9 471 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 SNX7Q9UNH6 387 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 PEX16Q9Y5Y5 336 aa15.85■□□□□ 0.13
CLIP4-201ENST00000320081 LOC285095A0A1B0GVY8 99 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 KHNYNO15037 678 aaKnown RBP15.84■□□□□ 0.13
CLIP4-201ENST00000320081 ZNF12P17014 697 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 ANKDD1AQ495B1 522 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.84■□□□□ 0.13
CLIP4-201ENST00000320081 ARMCX6Q7L4S7 300 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 COMMD6Q7Z4G1 85 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 HSD11B1LQ7Z5J1 315 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 CLEC14AQ86T13 490 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 OR5AR1Q8NGP9 310 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 HCN4Q9Y3Q4 1203 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 GRXCR1A8MXD5 290 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 HHLA1C9JL84 531 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 FSHRP23945 695 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 TIA1P31483 386 aaKnown RBP eCLIP15.84■□□□□ 0.13
CLIP4-201ENST00000320081 ATP4BP51164 291 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 RCAN2Q14206 197 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 OR8J3Q8NGG0 315 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 KLHL6Q8WZ60 621 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 SLC46A2Q9BY10 475 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 DNAJB1P25685 340 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 SLC15A1P46059 708 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 ZNF140P52738 457 aaPredicted RBP15.84■□□□□ 0.13
CLIP4-201ENST00000320081 CLDN8P56748 225 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 STXBP1P61764 594 aaKnown RBP15.84■□□□□ 0.13
CLIP4-201ENST00000320081 REEP3Q6NUK4 255 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 OR2T11Q8NH01 316 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 OR8K3Q8NH51 312 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 UBXN10Q96LJ8 280 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 ZNF696Q9H7X3 374 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 ASB1Q9Y576 335 aa15.84■□□□□ 0.13
CLIP4-201ENST00000320081 A0A1B0GTL3 188 aa15.83■□□□□ 0.13
CLIP4-201ENST00000320081 RPS17P08708 135 aaKnown RBP15.83■□□□□ 0.13
CLIP4-201ENST00000320081 ZNF30P17039 623 aa15.83■□□□□ 0.13
CLIP4-201ENST00000320081 HLA-FP30511 346 aa15.83■□□□□ 0.13
CLIP4-201ENST00000320081 OR2B6P58173 313 aa15.83■□□□□ 0.13
CLIP4-201ENST00000320081 NFATC3Q12968 1075 aa15.83■□□□□ 0.13
CLIP4-201ENST00000320081 PPIGQ13427 754 aaKnown RBP eCLIP15.83■□□□□ 0.13
CLIP4-201ENST00000320081 CTSL3PQ5NE16 218 aa15.83■□□□□ 0.13
CLIP4-201ENST00000320081 RTN4RL1Q86UN2 441 aaPredicted RBP15.83■□□□□ 0.13
CLIP4-201ENST00000320081 TMEM151AQ8N4L1 468 aa15.83■□□□□ 0.13
CLIP4-201ENST00000320081 NEIL2Q969S2 332 aa15.83■□□□□ 0.13
CLIP4-201ENST00000320081 NT5C3BQ969T7 300 aa15.83■□□□□ 0.13
CLIP4-201ENST00000320081 WACQ9BTA9 647 aa15.83■□□□□ 0.13
CLIP4-201ENST00000320081 DPH7Q9BTV6 452 aa15.83■□□□□ 0.13
CLIP4-201ENST00000320081 RC3H2Q9HBD1 1191 aaKnown RBP15.83■□□□□ 0.13
CLIP4-201ENST00000320081 POFUT2Q9Y2G5 429 aa15.83■□□□□ 0.13
CLIP4-201ENST00000320081 ZDBF2Q9HCK1 2354 aa15.83■□□□□ 0.13
CLIP4-201ENST00000320081 A0A096LPI6 279 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 ARHGEF33A8MVX0 844 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 J3QLW9 94 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 LSM1O15116 133 aaKnown RBP15.83■□□□□ 0.12
CLIP4-201ENST00000320081 ASGR2P07307 311 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 C1GALT1C1LP0DN25 315 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 C6P13671 934 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 ZNF19P17023 458 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 C21orf33P30042 268 aaPredicted RBP15.83■□□□□ 0.12
CLIP4-201ENST00000320081 SLC5A2P31639 672 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 ADRA1AP35348 466 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 OMPP47874 163 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 CDH11P55287 796 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 PIN1Q13526 163 aaPredicted RBP15.83■□□□□ 0.12
CLIP4-201ENST00000320081 PPP2R2DQ66LE6 453 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 TMPRSS9Q7Z410 1059 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 NLGN4XQ8N0W4 816 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 ANKFN1Q8N957 763 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 PPP1R14AQ96A00 147 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 C1QTNF1Q9BXJ1 281 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 EHD1Q9H4M9 534 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 PAK1IP1Q9NWT1 392 aaPredicted RBP15.83■□□□□ 0.12
CLIP4-201ENST00000320081 RGS17Q9UGC6 210 aaPredicted RBP15.83■□□□□ 0.12
CLIP4-201ENST00000320081 TRPS1Q9UHF7 1281 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 RPL36Q9Y3U8 105 aaKnown RBP15.83■□□□□ 0.12
CLIP4-201ENST00000320081 SCN1AP35498 2009 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 CSN2P05814 226 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 BMP2P12643 396 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 GGT1P19440 569 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 DDX6P26196 483 aaKnown RBP eCLIP15.83■□□□□ 0.12
CLIP4-201ENST00000320081 HLCSP50747 726 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 TMEM31Q5JXX7 168 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 SHQ1Q6PI26 577 aaKnown RBP15.83■□□□□ 0.12
CLIP4-201ENST00000320081 OR51L1Q8NGJ5 315 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 ZNF334Q9HCZ1 680 aaPredicted RBP15.83■□□□□ 0.12
CLIP4-201ENST00000320081 CCL26Q9Y258 94 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 TMED5Q9Y3A6 229 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 CLCA3PQ9Y6N3 262 aa15.83■□□□□ 0.12
CLIP4-201ENST00000320081 A0A1B0GVT2 93 aa15.82■□□□□ 0.12
CLIP4-201ENST00000320081 MATN1P21941 496 aa15.82■□□□□ 0.12
CLIP4-201ENST00000320081 SIM1P81133 766 aaPredicted RBP15.82■□□□□ 0.12
CLIP4-201ENST00000320081 SEMA3BQ13214 749 aa15.82■□□□□ 0.12
CLIP4-201ENST00000320081 DHCR24Q15392 516 aa15.82■□□□□ 0.12
CLIP4-201ENST00000320081 NHSL2Q5HYW2 709 aa15.82■□□□□ 0.12
CLIP4-201ENST00000320081 Q6ZSR9 355 aa15.82■□□□□ 0.12
CLIP4-201ENST00000320081 ZNF740Q8NDX6 193 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms