RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 AK4P27144 223 aaPredicted RBP11.87□□□□□ -0.51
RNF4-201ENST00000314289 NTSR1P30989 418 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 TRIM23P36406 574 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 MLLT10P55197 1068 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 RPS21P63220 83 aaKnown RBP11.87□□□□□ -0.51
RNF4-201ENST00000314289 CCL4L1Q8NHW4 92 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 ZFP90Q8TF47 636 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 YIPF2Q9BWQ6 316 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 AMBRA1Q9C0C7 1298 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 SLC6A16Q9GZN6 736 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 SCHIP1Q9P0W5 487 aaPredicted RBP11.87□□□□□ -0.51
RNF4-201ENST00000314289 TNRC18O15417 2968 aaPredicted RBP11.87□□□□□ -0.51
RNF4-201ENST00000314289 DENND4AQ7Z401 1863 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 ARHGEF17Q96PE2 2063 aaPredicted RBP11.87□□□□□ -0.51
RNF4-201ENST00000314289 WDR87Q6ZQQ6 2873 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 FOXE1O00358 373 aaPredicted RBP11.87□□□□□ -0.51
RNF4-201ENST00000314289 PRMT3O60678 531 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 PRKRAO75569 313 aaKnown RBP11.87□□□□□ -0.51
RNF4-201ENST00000314289 CCNDBP1O95273 360 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 EML2O95834 649 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 CTHP32929 405 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 EIF2DP41214 584 aaKnown RBP11.87□□□□□ -0.51
RNF4-201ENST00000314289 OR1E2P47887 323 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 PIGFQ07326 219 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 ADAM15Q13444 863 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 ENPP2Q13822 863 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 E2F2Q14209 437 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 KIAA1324Q6UXG2 1013 aaKnown RBP11.87□□□□□ -0.51
RNF4-201ENST00000314289 BTLAQ7Z6A9 289 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 SNX29P2Q8IUI4 249 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 SLC44A2Q8IWA5 706 aaPredicted RBP11.87□□□□□ -0.51
RNF4-201ENST00000314289 ADGRF3Q8IZF5 1079 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 DNAJB8Q8NHS0 232 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.87□□□□□ -0.518e-6■□□□□ 10.5
RNF4-201ENST00000314289 CHPT1Q8WUD6 406 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 CD320Q9NPF0 282 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 DAPK2Q9UIK4 370 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 ZNF451Q9Y4E5 1061 aa11.87□□□□□ -0.51
RNF4-201ENST00000314289 VPS13AQ96RL7 3174 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 SCN2AQ99250 2005 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 GLOD5A6NK44 160 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 ACSL1P33121 698 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 ADARB1P78563 741 aaKnown RBP11.86□□□□□ -0.51
RNF4-201ENST00000314289 SLC5A12Q1EHB4 618 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 TPRG1LQ5T0D9 272 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 NIPAL1Q6NVV3 410 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 LCTLQ6UWM7 567 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 IGFN1Q86VF2 1251 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 RNF130Q86XS8 419 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 METTL4Q8N3J2 472 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 SLC35B4Q969S0 331 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 TAMM41Q96BW9 452 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 COQ8BQ96D53 544 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 WDR34Q96EX3 536 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 DGCR6LQ9BY27 220 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 TRIM64A6NGJ6 449 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 HLCSP50747 726 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 TPD52P55327 224 aaPredicted RBP11.86□□□□□ -0.51
RNF4-201ENST00000314289 PCDH1Q08174 1060 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 KCNAB2Q13303 367 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 SDE2Q6IQ49 451 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 DGLUCYQ7Z3D6 616 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 SLC9B2Q86UD5 537 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 EID3Q8N140 333 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 KRT78Q8N1N4 520 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 ZCCHC7Q8N3Z6 543 aaKnown RBP11.86□□□□□ -0.51
RNF4-201ENST00000314289 TSACCQ96A04 125 aaPredicted RBP11.86□□□□□ -0.51
RNF4-201ENST00000314289 PDXPQ96GD0 296 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 C1QTNF2Q9BXJ5 285 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 LHPPQ9H008 270 aa11.86□□□□□ -0.51
RNF4-201ENST00000314289 IGKV1-8A0A0C4DH67 115 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 NARSO43776 548 aaKnown RBP11.85□□□□□ -0.51
RNF4-201ENST00000314289 SULT1C4O75897 302 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 CHI3L1P36222 383 aaPredicted RBP11.85□□□□□ -0.51
RNF4-201ENST00000314289 LTBRP36941 435 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 GSSP48637 474 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 MAPK12P53778 367 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 ZNF33BQ06732 778 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 RPA4Q13156 261 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 SIM2Q14190 667 aaPredicted RBP11.85□□□□□ -0.51
RNF4-201ENST00000314289 TMEM184AQ6ZMB5 413 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 SZRD1Q7Z422 152 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 ADHFE1Q8IWW8 467 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 OXR1Q8N573 874 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 TMEM145Q8NBT3 493 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 OR13F1Q8NGS4 319 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 EXOSC8Q96B26 276 aaKnown RBP11.85□□□□□ -0.51
RNF4-201ENST00000314289 OTUB1Q96FW1 271 aaPredicted RBP11.85□□□□□ -0.51
RNF4-201ENST00000314289 MBOAT4Q96T53 435 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 C17orf62Q9BQA9 187 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 OSBPL10Q9BXB5 764 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 EHD1Q9H4M9 534 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 SLAMF7Q9NQ25 335 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 SPHK1Q9NYA1 384 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 TAAR2Q9P1P5 351 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 SAMD4AQ9UPU9 718 aaKnown RBP11.85□□□□□ -0.51
RNF4-201ENST00000314289 ERGIC3Q9Y282 383 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 PTX3P26022 381 aaPredicted RBP11.85□□□□□ -0.51
RNF4-201ENST00000314289 HOXD12P35452 270 aa11.85□□□□□ -0.51
RNF4-201ENST00000314289 PPP2R2BQ00005 443 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms