RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 BIRC8Q96P09 236 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 ATG5Q9H1Y0 275 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 AKTIPQ9H8T0 292 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 SRRDQ9UH36 339 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 SMIM28A0A1B0GU29 152 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 MMAAQ8IVH4 418 aaKnown RBP14.96□□□□□ -0.01
HCFC1-201ENST00000310441 DCUN1D3Q8IWE4 304 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 SYT3Q9BQG1 590 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 KCNIP1Q9NZI2 227 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 BLOC1S5-TXNDC5H3BN57 136 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 TSPAN15O95858 294 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 MAGEA3P43357 314 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 GSG1LQ6UXU4 331 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 OR8J3Q8NGG0 315 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 KCNJ9Q92806 393 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 CREG1O75629 220 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 CASP6P55212 293 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 NKX6-1P78426 367 aaPredicted RBP14.96□□□□□ -0.01
HCFC1-201ENST00000310441 CTC1Q2NKJ3 1217 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 CARM1Q86X55 608 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 BCL7BQ9BQE9 202 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 COL20A1Q9P218 1284 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 BCAS2O75934 225 aaPredicted RBP14.96□□□□□ -0.01
HCFC1-201ENST00000310441 TBRG1Q3YBR2 411 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 ARHGAP40Q5TG30 622 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 ERMP1Q7Z2K6 904 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 OR13C3Q8NGS6 347 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 SLC5A11Q8WWX8 675 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 ISOC1Q96CN7 298 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 MSANTD3Q96H12 275 aa14.96□□□□□ -0.01
HCFC1-201ENST00000310441 TRMT61BQ9BVS5 477 aaKnown RBP14.96□□□□□ -0.01
HCFC1-201ENST00000310441 SPATA31C1P0DKV0 1188 aa14.96□□□□□ -0.02
HCFC1-201ENST00000310441 GPR143P51810 404 aa14.96□□□□□ -0.02
HCFC1-201ENST00000310441 EML3Q32P44 896 aa14.96□□□□□ -0.02
HCFC1-201ENST00000310441 CYBRD1Q53TN4 286 aa14.96□□□□□ -0.02
HCFC1-201ENST00000310441 GPR20Q99678 358 aa14.96□□□□□ -0.02
HCFC1-201ENST00000310441 B3GNT5Q9BYG0 378 aa14.96□□□□□ -0.02
HCFC1-201ENST00000310441 BACE2Q9Y5Z0 518 aa14.96□□□□□ -0.02
HCFC1-201ENST00000310441 DNAJB13P59910 316 aa14.96□□□□□ -0.02
HCFC1-201ENST00000310441 SDHAF4Q5VUM1 108 aa14.96□□□□□ -0.02
HCFC1-201ENST00000310441 TMEM205Q6UW68 189 aa14.96□□□□□ -0.02
HCFC1-201ENST00000310441 DCBLD1Q8N8Z6 715 aa14.96□□□□□ -0.02
HCFC1-201ENST00000310441 OR56B2PQ8NGI1 322 aa14.96□□□□□ -0.02
HCFC1-201ENST00000310441 KREMEN1Q96MU8 473 aa14.96□□□□□ -0.02
HCFC1-201ENST00000310441 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.95□□□□□ -0.02
HCFC1-201ENST00000310441 ERN2Q76MJ5 926 aaKnown RBP14.95□□□□□ -0.02
HCFC1-201ENST00000310441 ZDHHC14Q8IZN3 488 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 LRRC57Q8N9N7 239 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 PSMG2Q969U7 264 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 KIAA1143Q96AT1 154 aaPredicted RBP14.95□□□□□ -0.02
HCFC1-201ENST00000310441 GPATCH2Q9NW75 528 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 LRFN1Q9P244 771 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 TRAV6A0A075B6T7 132 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 D6RAR5 112 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 FAAHO00519 579 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 HOXA9P31269 272 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 CLCNKBP51801 687 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 NCS1P62166 190 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 VARS2Q5ST30 1063 aaKnown RBP14.95□□□□□ -0.02
HCFC1-201ENST00000310441 LDB1Q86U70 411 aaPredicted RBP14.95□□□□□ -0.02
HCFC1-201ENST00000310441 OR56A3Q8NH54 315 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 IL31RAQ8NI17 732 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 TBC1D15Q8TC07 691 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 C11orf84Q9BUA3 381 aaPredicted RBP14.95□□□□□ -0.02
HCFC1-201ENST00000310441 LCHNA4D1U4 455 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 C9IYK1 514 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 KLK1P06870 262 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 ZNF182P17025 639 aaPredicted RBP14.95□□□□□ -0.02
HCFC1-201ENST00000310441 TAS1R3Q7RTX0 852 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 NFKBIDQ8NI38 313 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 RNF128Q8TEB7 428 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 ZDHHC12Q96GR4 267 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 NAA11Q9BSU3 229 aaPredicted RBP14.95□□□□□ -0.02
HCFC1-201ENST00000310441 STRADBQ9C0K7 418 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 EPHA6Q9UF33 1036 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 IRF6O14896 467 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 ECI2O75521 394 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 RAB4AP20338 218 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 PPP5CP53041 499 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 MADCAM1Q13477 382 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 CARD16Q5EG05 197 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 HERC2P3Q9BVR0 1158 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 PDZD7Q9H5P4 517 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 ARID1AO14497 2285 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 SAP18O00422 153 aaKnown RBP14.95□□□□□ -0.02
HCFC1-201ENST00000310441 EMX2Q04743 252 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 ZNF529Q6P280 563 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 ARHGAP11AQ6P4F7 1023 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 SLAIN1Q8ND83 568 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 ARL11Q969Q4 196 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 FKBPLQ9UIM3 349 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 COL5A2P05997 1499 aaPredicted RBP14.95□□□□□ -0.02
HCFC1-201ENST00000310441 TMEM131LA2VDJ0 1609 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 GRXCR2A6NFK2 248 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 TVP23AA6NH52 213 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 SLC31A1O15431 190 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 FXYD6P3P58550 94 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 VASH1Q7L8A9 365 aaPredicted RBP14.95□□□□□ -0.02
HCFC1-201ENST00000310441 OR7G2Q8NG99 324 aa14.95□□□□□ -0.02
HCFC1-201ENST00000310441 BBS10Q8TAM1 723 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms