RNA–Protein interactions for RNA: ENST00000309246.9

TPT1-201, Transcript of tumor protein, translationally-controlled 1, humanhuman

TSL 1 (best) BASIC

Gene TPT1, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPT1-201ENST00000309246 CAPN3P20807 821 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 HNRNPH1P31943 449 aaKnown RBP11.35□□□□□ -0.59
TPT1-201ENST00000309246 ELK3P41970 407 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 NR0B1P51843 470 aaKnown RBP11.35□□□□□ -0.59
TPT1-201ENST00000309246 HNRNPFP52597 415 aaKnown RBP11.35□□□□□ -0.59
TPT1-201ENST00000309246 BTN3A2P78410 334 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 RUNX2Q13950 521 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 ZNF460Q14592 562 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 C18orf21Q32NC0 220 aaPredicted RBP11.35□□□□□ -0.59
TPT1-201ENST00000309246 C16orf47Q6ZP98 133 aaPredicted RBP11.35□□□□□ -0.59
TPT1-201ENST00000309246 SCUBE1Q8IWY4 988 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 RPRMLQ8N4K4 120 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 TMEM52Q8NDY8 209 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 OR52N2Q8NGI0 321 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 C16orf52Q8NHV5 167 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 ACTRT1Q8TDG2 376 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 SREK1Q8WXA9 508 aaKnown RBP11.35□□□□□ -0.59
TPT1-201ENST00000309246 CCT6BQ92526 530 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 NCLNQ969V3 563 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 GAL3ST3Q96A11 431 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 VMP1Q96GC9 406 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 PWWP2AQ96N64 755 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 EGFL8Q99944 293 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 WDR83Q9BRX9 315 aaKnown RBP11.35□□□□□ -0.59
TPT1-201ENST00000309246 TMUB1Q9BVT8 246 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 DDX47Q9H0S4 455 aaKnown RBP11.35□□□□□ -0.59
TPT1-201ENST00000309246 PRTFDC1Q9NRG1 225 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 MMACHCQ9Y4U1 282 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 KCNE2Q9Y6J6 123 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 ARHGAP21Q5T5U3 1957 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 ANKRD17O75179 2603 aaKnown RBP11.35□□□□□ -0.59
TPT1-201ENST00000309246 NCKAP5O14513 1909 aa11.35□□□□□ -0.59
TPT1-201ENST00000309246 NKX2-6A6NCS4 301 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 ERI3O43414 337 aaKnown RBP11.34□□□□□ -0.59
TPT1-201ENST00000309246 WDR47O94967 919 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 SSR4P51571 173 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 RAB38P57729 211 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 STXBP1P61764 594 aaKnown RBP11.34□□□□□ -0.59
TPT1-201ENST00000309246 TERF2Q15554 542 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 TESK1Q15569 626 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 CLNKQ7Z7G1 428 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 SLC35F6Q8N357 371 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 FAM47BQ8NA70 645 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 ZFP62Q8NB50 900 aaPredicted RBP11.34□□□□□ -0.59
TPT1-201ENST00000309246 PDLIM5Q96HC4 596 aaKnown RBP11.34□□□□□ -0.59
TPT1-201ENST00000309246 FAR2Q96K12 515 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 TREX2Q9BQ50 279 aaPredicted RBP11.34□□□□□ -0.59
TPT1-201ENST00000309246 CCDC77Q9BR77 488 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 DEFB127Q9H1M4 99 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 LIN28AQ9H9Z2 209 aaKnown RBP11.34□□□□□ -0.59
TPT1-201ENST00000309246 DEPPQ9NTK1 212 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 KCMF1Q9P0J7 381 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 ERVK-11Q9UQG0 969 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 RNF6Q9Y252 685 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 CLDN16Q9Y5I7 305 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 PSAT1Q9Y617 370 aa11.34□□□□□ -0.59
TPT1-201ENST00000309246 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.34□□□□□ -0.591e-25■□□□□ 8.3
TPT1-201ENST00000309246 MYOCOSA0A1B0GUC4 107 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 FAM95CA0A1B0GW59 222 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 PINLYPA6NC86 204 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 FAM166BA8MTA8 275 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 A8MVJ9 347 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 FANCGO15287 622 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 TUBB4AP04350 444 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 C1GALT1C1LP0DN25 315 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 IVDP26440 423 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 GDF5P43026 501 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 GPR143P51810 404 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 CDKL1Q00532 357 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 SLC13A2Q13183 592 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 SLBPQ14493 270 aaKnown RBP eCLIP11.33□□□□□ -0.6
TPT1-201ENST00000309246 TSNQ15631 228 aaKnown RBP11.33□□□□□ -0.6
TPT1-201ENST00000309246 STEAP4Q687X5 459 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 TMEM211Q6ICI0 200 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 SLCO4C1Q6ZQN7 724 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 FRA10AC1Q70Z53 315 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 ZC3HC1Q86WB0 502 aaKnown RBP11.33□□□□□ -0.6
TPT1-201ENST00000309246 KLHDC8AQ8IYD2 350 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 PDIK1LQ8N165 341 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 NKAPQ8N5F7 415 aaKnown RBP11.33□□□□□ -0.6
TPT1-201ENST00000309246 PSD4Q8NDX1 1056 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 ASB5Q8WWX0 329 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 MS4A6EQ96DS6 147 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 UCK2Q9BZX2 261 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 TP63Q9H3D4 680 aaPredicted RBP11.33□□□□□ -0.6
TPT1-201ENST00000309246 ADAP2Q9NPF8 381 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 TIMMDC1Q9NPL8 285 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 HPF1Q9NWY4 346 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 PPIEQ9UNP9 301 aaKnown RBP11.33□□□□□ -0.6
TPT1-201ENST00000309246 YARS2Q9Y2Z4 477 aaKnown RBP11.33□□□□□ -0.6
TPT1-201ENST00000309246 OARD1Q9Y530 152 aa11.33□□□□□ -0.6
TPT1-201ENST00000309246 FREM3P0C091 2139 aa11.32□□□□□ -0.6
TPT1-201ENST00000309246 A0A0G2JMM0 328 aa11.32□□□□□ -0.6
TPT1-201ENST00000309246 A0A1W2PPB8 328 aa11.32□□□□□ -0.6
TPT1-201ENST00000309246 A0A1W2PRS3 328 aa11.32□□□□□ -0.6
TPT1-201ENST00000309246 LRIT2A6NDA9 550 aa11.32□□□□□ -0.6
TPT1-201ENST00000309246 NCF1BA6NI72 391 aaPredicted RBP11.32□□□□□ -0.6
TPT1-201ENST00000309246 TMEM200CA6NKL6 621 aa11.32□□□□□ -0.6
TPT1-201ENST00000309246 USP27XA6NNY8 438 aa11.32□□□□□ -0.6
TPT1-201ENST00000309246 NCF1CA8MVU1 366 aaPredicted RBP11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms