RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 RIPK1Q13546 671 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 ADAMTS18Q8TE60 1221 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 TRIB3Q96RU7 358 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 RGPD4Q7Z3J3 1758 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 ENO4A6NNW6 628 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 INMTO95050 263 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 HMGCLP35914 325 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 OR8K5Q8NH50 307 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 DTD2Q96FN9 168 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 ASB6Q9NWX5 421 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 CSTAP01040 98 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 HOXC13P31276 330 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 CDKN2DP55273 166 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 CDK6Q00534 326 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 ALKAL1Q6UXT8 129 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 ZNF550Q7Z398 422 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 FAM156AQ8NDB6 213 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 ZFYVE21Q9BQ24 234 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 ZIM2Q9NZV7 527 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 MCM3APO60318 1980 aa10.29□□□□□ -0.76
SYNPO2-201ENST00000307142 KIR2DS5A0A0G2JLQ3 304 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 A0A0G2JNG1 304 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 SLC9B1P1A6NJY1 282 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 KIR2DS3K7RE56 304 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 NOBOXO60393 691 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 FARS2O95363 451 aaKnown RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 UQCRC2P22695 453 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 CHN2P52757 468 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 KIR2DS5Q14953 304 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 MPP7Q5T2T1 576 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 RBM15BQ8NDT2 890 aaKnown RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 LRRC58Q96CX6 371 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 GON4LQ3T8J9 2241 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 A0A1B0GTW7 788 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 H7C0S8 307 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 ZNF28P17035 718 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 RPA4Q13156 261 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 TMEM35AQ53FP2 167 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 SLC2A7Q6PXP3 512 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 PDPRQ8NCN5 879 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 EPHA6Q9UF33 1036 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 RIMKLBQ9ULI2 386 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 BTBD3Q9Y2F9 522 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 FAM149AA5PLN7 773 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 LINC01565O15544 149 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 IL3P08700 152 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 PRSS56P0CW18 603 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 GALK2Q01415 458 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 RBPJQ06330 500 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 PMS2P3Q13401 168 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 ZDHHC24Q6UX98 284 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 SLC6A18Q96N87 628 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 GAL3ST1Q99999 423 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 LRRC3Q9BY71 257 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 IFT46Q9NQC8 304 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 TMEM184CQ9NVA4 438 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 ANXA2P2A6NMY6 339 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 S1PR4O95977 384 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 ANXA2P07355 339 aaKnown RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 PORP16435 677 aaPredicted RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 ELF3P78545 371 aaPredicted RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 TP53INP2Q8IXH6 220 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 KLHDC8AQ8IYD2 350 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 OR56A3Q8NH54 315 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 PEX13Q92968 403 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 KCNK12Q9HB15 430 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 C14orf105Q9NVL8 296 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 FAM120CQ9NX05 1096 aaKnown RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 MARCH4Q9P2E8 410 aaPredicted RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 TRIP12Q14669 1992 aaPredicted RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 SIPA1L3O60292 1781 aaPredicted RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 TRBC2A0A5B9 178 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 C1orf226A1L170 272 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 SGK494L7N484 410 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 H1F0P07305 194 aaKnown RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 MAP3K8P41279 467 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 LEPRP48357 1165 aaKnown RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 ZNF84P51523 738 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 FOLH1Q04609 750 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 EEF1A2Q05639 463 aaKnown RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 NFATC4Q14934 902 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 MZT2BQ6NZ67 158 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 SPATC1Q76KD6 591 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 PPP1R3BQ86XI6 285 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 UBALD2Q8IYN6 164 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 FAM174AQ8TBP5 190 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 RAB8BQ92930 207 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 POLR2J3Q9H1A7 115 aaKnown RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 HMG20AQ9NP66 347 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 PAK6Q9NQU5 681 aaPredicted RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 LRCH1Q9Y2L9 728 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 KIAA1217Q5T5P2 1943 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 DAPL1A0PJW8 107 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 TFECO14948 347 aaPredicted RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 TACSTD2P09758 323 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 NELFEP18615 380 aaKnown RBP10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 IL4RP24394 825 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 MANEALQ5VSG8 457 aa10.28□□□□□ -0.76
SYNPO2-201ENST00000307142 NKAIN2Q5VXU1 208 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms