RNA–Protein interactions for RNA: ENST00000306024.3

LSM3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM3, Length 3,815 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3-201ENST00000306024 TTPAP49638 278 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 CSNK2BP67870 215 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 RPP38P78345 283 aaKnown RBP10.48□□□□□ -0.73
LSM3-201ENST00000306024 FADDQ13158 208 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 RCAN2Q14206 197 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 NFE2L1Q14494 772 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 FGFBP1Q14512 234 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 TSNQ15631 228 aaKnown RBP10.48□□□□□ -0.73
LSM3-201ENST00000306024 AP5B1Q2VPB7 878 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 OR2T5Q6IEZ7 315 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 BRAT1Q6PJG6 821 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 CHMP1BQ7LBR1 199 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 PHACTR4Q8IZ21 702 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 TAGAPQ8N103 731 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 OR2T29Q8NH02 315 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 GPR151Q8TDV0 419 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 DNAJA4Q8WW22 397 aaPredicted RBP10.48□□□□□ -0.73
LSM3-201ENST00000306024 GPR78Q96P69 363 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 OR52E6Q96RD3 313 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 PDFQ9HBH1 243 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 AIG1Q9NVV5 245 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 AP3M1Q9Y2T2 418 aa10.48□□□□□ -0.73
LSM3-201ENST00000306024 GLYATL1P3A0A0U1RQE8 302 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 AXIN1O15169 862 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 OR4F21O95013 312 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 IFNA7P01567 189 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 SRPRAP08240 638 aaKnown RBP10.47□□□□□ -0.73
LSM3-201ENST00000306024 SGCGQ13326 291 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 C1DQ13901 141 aaKnown RBP10.47□□□□□ -0.73
LSM3-201ENST00000306024 MAD2L1BPQ15013 274 aaPredicted RBP10.47□□□□□ -0.73
LSM3-201ENST00000306024 TATDN3Q17R31 274 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 UGT3A2Q3SY77 523 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 FAM174BQ3ZCQ3 159 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 ASTLQ6HA08 431 aaPredicted RBP10.47□□□□□ -0.73
LSM3-201ENST00000306024 ANKRD49Q8WVL7 239 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 SLC13A3Q8WWT9 602 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 UBE2FQ969M7 185 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 TESCQ96BS2 214 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 COQ8BQ96D53 544 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 METTL2AQ96IZ6 378 aaKnown RBP10.47□□□□□ -0.73
LSM3-201ENST00000306024 COL21A1Q96P44 957 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 LRRC3BQ96PB8 259 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 DPCDQ9BVM2 203 aaPredicted RBP10.47□□□□□ -0.73
LSM3-201ENST00000306024 GTPBP2Q9BX10 602 aaKnown RBP10.47□□□□□ -0.73
LSM3-201ENST00000306024 NLKQ9UBE8 527 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 B4GALT6Q9UBX8 382 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 HS3ST2Q9Y278 367 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 NCKAP1Q9Y2A7 1128 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 POU2F2P09086 479 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 UGT2B10P36537 528 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 YBX1P67809 324 aaKnown RBP10.47□□□□□ -0.73
LSM3-201ENST00000306024 ZNF234Q14588 700 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 UBXN2BQ14CS0 331 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 ZNF648Q5T619 568 aaPredicted RBP10.47□□□□□ -0.73
LSM3-201ENST00000306024 CREB3L2Q70SY1 520 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 FBXL6Q8N531 539 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 FATE1Q969F0 183 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 CHFRQ96EP1 664 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 DUSP21Q9H596 190 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 HEBP1Q9NRV9 189 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 MCUBQ9NWR8 336 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 B3GNT2Q9NY97 397 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 TAS2R13Q9NYV9 303 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 ZIM2Q9NZV7 527 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 SPASTQ9UBP0 616 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 OR2A25A4D2G3 310 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 PEX11BO96011 259 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 MAP2K3P46734 347 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 RGS4P49798 205 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 TPRG1Q6ZUI0 275 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 FAM217AQ8IXS0 508 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 ZZZ3Q8IYH5 903 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 TMEM132CQ8N3T6 1108 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 ELSPBP1Q96BH3 223 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 HYLS1Q96M11 299 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 ERVMER34-1Q9H9K5 563 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 RIMKLBQ9ULI2 386 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 SAMD4AQ9UPU9 718 aaKnown RBP10.47□□□□□ -0.73
LSM3-201ENST00000306024 SLC9A8Q9Y2E8 581 aa10.47□□□□□ -0.73
LSM3-201ENST00000306024 UPK3BL1B0FP48 263 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 TARM1B6A8C7 271 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 UPK3BL2E5RIL1 263 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 SEC22BO75396 215 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 UGT2B17O75795 530 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 MLYCDO95822 493 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 SLC2A2P11168 524 aaPredicted RBP10.46□□□□□ -0.73
LSM3-201ENST00000306024 HOXB2P14652 356 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 HNF1BP35680 557 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 SPAM1P38567 509 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 RPL35P42766 123 aaKnown RBP10.46□□□□□ -0.73
LSM3-201ENST00000306024 GZMKP49863 264 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 ARSDP51689 593 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 ST3GAL4Q11206 333 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 GPR50Q13585 617 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 IL18Q14116 193 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 ELAVL3Q14576 367 aaKnown RBP10.46□□□□□ -0.73
LSM3-201ENST00000306024 ZNF789Q5FWF6 425 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 LRRC66Q68CR7 880 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 RAET1GQ6H3X3 334 aa10.46□□□□□ -0.73
LSM3-201ENST00000306024 PTCRAQ6ISU1 281 aaPredicted RBP10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms