RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 CCDC115Q96NT0 180 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 SEMA3CQ99985 751 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 CTPS2Q9NRF8 586 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 ZNF214Q9UL59 606 aaPredicted RBP13.84□□□□□ -0.19
CDT1-201ENST00000301019 TRAPPC4Q9Y296 219 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 CHD5Q8TDI0 1954 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 CCDC88CQ9P219 2028 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 RRN3P2A6NIE6 340 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 LINC00587B1AMM8 73 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 IFRD1O00458 451 aaPredicted RBP13.84□□□□□ -0.19
CDT1-201ENST00000301019 ULK1O75385 1050 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 VPS26AO75436 327 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 TRAPPC2P0DI81 140 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 TRAPPC2BP0DI82 140 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 CBR1P16152 277 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 PTNP21246 168 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 CRYBB2P43320 205 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 HNMTP50135 292 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 RPS25P62851 125 aaKnown RBP13.84□□□□□ -0.19
CDT1-201ENST00000301019 SOX4Q06945 474 aaPredicted RBP13.84□□□□□ -0.19
CDT1-201ENST00000301019 GTF2H2Q13888 395 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 MELKQ14680 651 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 GTF2H2CQ6P1K8 395 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 LUZP2Q86TE4 346 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 TINF2Q9BSI4 451 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 DUSP16Q9BY84 665 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 ABCG5Q9H222 651 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 ZFP64Q9NPA5 681 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 TXNL4BQ9NX01 149 aaKnown RBP13.84□□□□□ -0.19
CDT1-201ENST00000301019 LOXHD1Q8IVV2 1947 aa13.84□□□□□ -0.19
CDT1-201ENST00000301019 A0A0G2JLL6 359 aaPredicted RBP13.83□□□□□ -0.19
CDT1-201ENST00000301019 MATN3O15232 486 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 LDB2O43679 373 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 CCR6P51684 374 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 NFKB2Q00653 900 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 GPR17Q13304 367 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 LDLRAD1Q5T700 205 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 SDHAF4Q5VUM1 108 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 WASH2PQ6VEQ5 465 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 RTL4Q6ZR62 310 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 PAQR9Q6ZVX9 377 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 PRRT2Q7Z6L0 340 aaPredicted RBP13.83□□□□□ -0.19
CDT1-201ENST00000301019 FAM124AQ86V42 546 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 UXS1Q8NBZ7 420 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 OR8D4Q8NGM9 314 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 ZNF707Q96C28 371 aaPredicted RBP13.83□□□□□ -0.19
CDT1-201ENST00000301019 AARSD1Q9BTE6 412 aaKnown RBP13.83□□□□□ -0.19
CDT1-201ENST00000301019 SPRTNQ9H040 489 aaPredicted RBP13.83□□□□□ -0.19
CDT1-201ENST00000301019 HEXA-AS1Q9H8Q6 139 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 C3orf14Q9HBI5 128 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 LRTM1Q9HBL6 345 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 OR6C2Q9NZP2 312 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 COPZ2Q9P299 210 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 PLEKHB1Q9UF11 243 aaPredicted RBP13.83□□□□□ -0.19
CDT1-201ENST00000301019 CLCA2Q9UQC9 943 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 KLK4Q9Y5K2 254 aa13.83□□□□□ -0.19
CDT1-201ENST00000301019 A0A1B0GVM2 712 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 M0R233 179 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 OR7A17O14581 309 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 CXCL11O14625 94 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 TO15178 435 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 HRO43593 1189 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 RECQL4O94761 1208 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 OAZ1P54368 228 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 IQCCQ4KMZ1 466 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 ATP13A5Q4VNC0 1218 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 ATXN7L2Q5T6C5 722 aaPredicted RBP13.83□□□□□ -0.2
CDT1-201ENST00000301019 C9orf57Q5W0N0 161 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 PSAPL1Q6NUJ1 521 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 GPR155Q7Z3F1 870 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 HDDC2Q7Z4H3 204 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 AADATQ8N5Z0 425 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 CLDN19Q8N6F1 224 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 C3orf58Q8NDZ4 430 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 HMCESQ96FZ2 354 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 TINAGL1Q9GZM7 467 aaPredicted RBP13.83□□□□□ -0.2
CDT1-201ENST00000301019 TFB2MQ9H5Q4 396 aaKnown RBP13.83□□□□□ -0.2
CDT1-201ENST00000301019 ANKRA2Q9H9E1 313 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 LHX6Q9UPM6 363 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 MED16Q9Y2X0 877 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 SNX11Q9Y5W9 270 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 SLC22A23A1A5C7 686 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 H0YC42 278 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 ARNTLO00327 626 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 EEF1E1O43324 174 aaKnown RBP13.83□□□□□ -0.2
CDT1-201ENST00000301019 MAZP56270 477 aaKnown RBP13.83□□□□□ -0.2
CDT1-201ENST00000301019 PCDH1Q08174 1060 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 COL9A2Q14055 689 aaPredicted RBP13.83□□□□□ -0.2
CDT1-201ENST00000301019 ARHGEF7Q14155 803 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 FBXO43Q4G163 708 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 FAM9CQ8IZT9 166 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 AP2M1Q96CW1 435 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 WDR89Q96FK6 387 aaPredicted RBP13.83□□□□□ -0.2
CDT1-201ENST00000301019 ZFP42Q96MM3 310 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 NELL2Q99435 816 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 ZCCHC4Q9H5U6 513 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 NLGN3Q9NZ94 848 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 KCMF1Q9P0J7 381 aa13.83□□□□□ -0.2
CDT1-201ENST00000301019 LOC730098B7Z3J9 87 aa13.82□□□□□ -0.2
CDT1-201ENST00000301019 CCNDBP1O95273 360 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms