RNA–Protein interactions for RNA: ENST00000299633.6

HDGFL3-201, Transcript of HDGF like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDGFL3, Length 12,733 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-201ENST00000299633 RIN1Q13671 783 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 SLC30A7Q8NEW0 376 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 TSTD1Q8NFU3 115 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 OR13C3Q8NGS6 347 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 TMEM169Q96HH4 297 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 CLCA3PQ9Y6N3 262 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 CXCR3P49682 368 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 HNRNPFP52597 415 aaKnown RBP10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 SNRPD1P62314 119 aaKnown RBP10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 PAOXQ6QHF9 649 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 ZNF852Q6ZMS4 543 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 ANKRD52Q8NB46 1076 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 TLCD1Q96CP7 247 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 EBPLQ9BY08 206 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 KLF1Q13351 362 aaPredicted RBP10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 DPYSL2Q16555 572 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 NDUFA9Q16795 377 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 ODF4Q2M2E3 257 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 CAPN13Q6MZZ7 669 aaPredicted RBP10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 FAM109AQ8N4B1 249 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 OR10G6Q8NH81 332 aa10.82□□□□□ -0.68
HDGFL3-201ENST00000299633 PQBP1O60828 265 aaKnown RBP10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 PLGP00747 810 aaPredicted RBP10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 CCDC71LQ8N9Z2 235 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 ZBTB45Q96K62 511 aaPredicted RBP10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 GNRH1P01148 92 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 ALPPL2P10696 532 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 PROZP22891 400 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 HSF1Q00613 529 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 BCL2L15Q5TBC7 163 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 TRIM46Q7Z4K8 759 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 KCTD20Q7Z5Y7 419 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 COX18Q8N8Q8 333 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 K7EPI3 171 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 RCBTB2O95199 551 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 CNOT4O95628 575 aaKnown RBP10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 MPP1Q00013 466 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 HCAR2Q8TDS4 363 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 CPT1BQ92523 772 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 TP63Q9H3D4 680 aaPredicted RBP10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 OSER1Q9NX31 292 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 TCRBV7S2A1N4TA0A589 114 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 ARAFP10398 606 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 TNK1Q13470 666 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 TMEM31Q5JXX7 168 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 TMEM205Q6UW68 189 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 CCBE1Q6UXH8 406 aaPredicted RBP10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 CMC1Q7Z7K0 106 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 CMIPQ8IY22 773 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 GTF2H4Q92759 462 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 SAT2Q96F10 170 aaPredicted RBP10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 EFCAB11Q9BUY7 163 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 ACSS3Q9H6R3 686 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 MAGEB17A8MXT2 336 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 CLIC1O00299 241 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 TRUB2O95900 331 aaKnown RBP10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 GTF2H2Q13888 395 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 RAB11BQ15907 218 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 PDSS1Q5T2R2 415 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 GTF2H2CQ6P1K8 395 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 TATDN1Q6P1N9 297 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 ESPNLQ6ZVH7 1005 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 OR2A12Q8NGT7 310 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 OR4L1Q8NH43 312 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 IFI44Q8TCB0 444 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 EPS8L1Q8TE68 723 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 SLC35A5Q9BS91 424 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 SMPD4Q9NXE4 827 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 POLHQ9Y253 713 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 LRRC10BA6NIK2 292 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 CD3GP09693 182 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 CETPP11597 493 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 TAS2R43P59537 309 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 PPA1Q15181 289 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 GRIK4Q16099 956 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 OTOP1Q7RTM1 612 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 TREML1Q86YW5 311 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 ANGPTL6Q8NI99 470 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 LNX1Q8TBB1 728 aaPredicted RBP10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 FBRSL1Q9HCM7 1045 aaKnown RBP10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 ASH2LQ9UBL3 628 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 DDTLA6NHG4 134 aaPredicted RBP10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 A6NHS1 94 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 SLC6A3Q01959 620 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 UGT3A2Q3SY77 523 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 FAM183BPQ6ZVS7 135 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 RBFAQ8N0V3 343 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 TP53TG5Q9Y2B4 290 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 NSA2O95478 260 aaKnown RBP10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 PPP2CAP67775 309 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 LINC00471Q8N535 108 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 FAM83FQ8NEG4 500 aaPredicted RBP10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 GRHL3Q8TE85 626 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 SLC6A16Q9GZN6 736 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 POMPQ9Y244 141 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 COLEC10Q9Y6Z7 277 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 PAEPP09466 180 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 CYCSP99999 105 aaKnown RBP10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 POU4F3Q15319 338 aa10.81□□□□□ -0.68
HDGFL3-201ENST00000299633 LGI2Q8N0V4 545 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms