RNA–Protein interactions for RNA: ENST00000299130.7

BCCIP-202, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-202ENST00000299130 C12orf40Q86WS4 652 aa13.02□□□□□ -0.32
BCCIP-202ENST00000299130 TRAPPC5Q8IUR0 188 aa13.02□□□□□ -0.32
BCCIP-202ENST00000299130 ZNF547Q8IVP9 402 aa13.02□□□□□ -0.32
BCCIP-202ENST00000299130 CXorf40BQ96DE9 158 aa13.02□□□□□ -0.32
BCCIP-202ENST00000299130 WDR34Q96EX3 536 aa13.02□□□□□ -0.32
BCCIP-202ENST00000299130 FAM129BQ96TA1 746 aa13.02□□□□□ -0.32
BCCIP-202ENST00000299130 SLC6A16Q9GZN6 736 aa13.02□□□□□ -0.32
BCCIP-202ENST00000299130 EHD1Q9H4M9 534 aa13.02□□□□□ -0.32
BCCIP-202ENST00000299130 MS4A12Q9NXJ0 267 aa13.02□□□□□ -0.32
BCCIP-202ENST00000299130 SCHIP1Q9P0W5 487 aaPredicted RBP13.02□□□□□ -0.32
BCCIP-202ENST00000299130 DYRK1BQ9Y463 629 aa13.02□□□□□ -0.32
BCCIP-202ENST00000299130 PRKAB1Q9Y478 270 aa13.02□□□□□ -0.32
BCCIP-202ENST00000299130 CFAP20Q9Y6A4 193 aaKnown RBP13.02□□□□□ -0.32
BCCIP-202ENST00000299130 LRRK1Q38SD2 2015 aa13.02□□□□□ -0.32
BCCIP-202ENST00000299130 A0A1W2PRB8 838 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 ZNF197O14709 1029 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 FKTNO75072 461 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 GASTP01350 101 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 ADH1AP07327 375 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 LIMS1P48059 325 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 NFE2L1Q14494 772 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 ZNF404Q494X3 552 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 TCEAL5Q5H9L2 206 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 NXPE4Q6UWF7 544 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 CCDC80Q76M96 950 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 ZNF605Q86T29 641 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 KIAA1958Q8N8K9 716 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 OR9A1PQ8NGU1 263 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 FCGR1BQ92637 280 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 COQ10AQ96MF6 247 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 DACH2Q96NX9 599 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 CENPOQ9BU64 300 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 ABCG4Q9H172 646 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 TMEM38AQ9H6F2 299 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 ABCB10Q9NRK6 738 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 THSD1Q9NS62 852 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 QPCTLQ9NXS2 382 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 TAS2R9Q9NYW1 312 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 TAAR2Q9P1P5 351 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 NOTCH4Q99466 2003 aa13.02□□□□□ -0.33
BCCIP-202ENST00000299130 MTCL1Q9Y4B5 1905 aaKnown RBP13.01□□□□□ -0.33
BCCIP-202ENST00000299130 TMEM221A6NGB7 291 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 RHOP08100 348 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 HSMCR30P0CW71 290 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 PPM1AP35813 382 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 UGT2B10P36537 528 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 NNMTP40261 264 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 EIF2B2P49770 351 aaKnown RBP13.01□□□□□ -0.33
BCCIP-202ENST00000299130 PPP5CP53041 499 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 PTGES3Q15185 160 aaKnown RBP13.01□□□□□ -0.33
BCCIP-202ENST00000299130 CRB2Q5IJ48 1285 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 FAM83HQ6ZRV2 1179 aaPredicted RBP13.01□□□□□ -0.33
BCCIP-202ENST00000299130 TRMT11Q7Z4G4 463 aaKnown RBP13.01□□□□□ -0.33
BCCIP-202ENST00000299130 METTL4Q8N3J2 472 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 STX19Q8N4C7 294 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 FAM83FQ8NEG4 500 aaPredicted RBP13.01□□□□□ -0.33
BCCIP-202ENST00000299130 B3GNT7Q8NFL0 401 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 SLC5A11Q8WWX8 675 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 ING5Q8WYH8 240 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 REPS1Q96D71 796 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 DTD2Q96FN9 168 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 LRRC3BQ96PB8 259 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 OR5M11Q96RB7 305 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 PIP5K1AQ99755 562 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 PSD2Q9BQI7 771 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 ACAT2Q9BWD1 397 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 C6orf62Q9GZU0 229 aaPredicted RBP13.01□□□□□ -0.33
BCCIP-202ENST00000299130 CXorf36Q9H7Y0 433 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 MYNNQ9NPC7 610 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 ATAD3AQ9NVI7 634 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 DKK3Q9UBP4 350 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 DUSP12Q9UNI6 340 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 MAPRE3Q9UPY8 281 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 TRBC2A0A5B9 178 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 RTCAO00442 366 aaKnown RBP13.01□□□□□ -0.33
BCCIP-202ENST00000299130 FFAR1O14842 300 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 AQP9O43315 295 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 DNTTP04053 509 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 PCBP3P57721 371 aaKnown RBP13.01□□□□□ -0.33
BCCIP-202ENST00000299130 RBBP4Q09028 425 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 PUM1Q14671 1186 aaKnown RBP eCLIP13.01□□□□□ -0.331e-6■■□□□ 13.5
BCCIP-202ENST00000299130 ARMCX4Q5H9R4 360 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 AGAP7PQ5VUJ5 663 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 KLHL17Q6TDP4 642 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 LYSMD2Q8IV50 215 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 OXR1Q8N573 874 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 AQP11Q8NBQ7 271 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 TOX2Q96NM4 488 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 EFCAB11Q9BUY7 163 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 CDADC1Q9BWV3 514 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 MIR1-1HGQ9H1L0 117 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 EPS8L2Q9H6S3 715 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 SLAMF7Q9NQ25 335 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 PCDHGA3Q9Y5H0 932 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 SNX8Q9Y5X2 465 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 AP1M2Q9Y6Q5 423 aa13.01□□□□□ -0.33
BCCIP-202ENST00000299130 CCDC88CQ9P219 2028 aa13□□□□□ -0.33
BCCIP-202ENST00000299130 PTPRSQ13332 1948 aa13□□□□□ -0.33
BCCIP-202ENST00000299130 KIAA1549LQ6ZVL6 1849 aa13□□□□□ -0.33
BCCIP-202ENST00000299130 GADD45GO95257 159 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms