RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 TMEM154Q6P9G4 183 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 IKBIPQ70UQ0 350 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 PAGE2Q7Z2X7 111 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 GOT1L1Q8NHS2 421 aaPredicted RBP24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 EVA1BQ9NVM1 165 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 MAPRE3Q9UPY8 281 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 AP3M1Q9Y2T2 418 aa24.4■■□□□ 1.5
SDCCAG3-201ENST00000298537 PLOD2O00469 737 aa24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 MAP3K13O43283 966 aa24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 SH3BP5O60239 455 aa24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 CTSVO60911 334 aa24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 LDLRP01130 860 aa24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 LYNP07948 512 aa24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 SERPINB1P30740 379 aa24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 CRATP43155 626 aa24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 SLC5A12Q1EHB4 618 aa24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 ZNF438Q7Z4V0 828 aa24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 SHISA5Q8N114 240 aa24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 LRRC61Q9BV99 259 aa24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 PRDM7Q9NQW5 492 aa24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 ZNF282Q9UDV7 671 aaPredicted RBP24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 MAP4K5Q9Y4K4 846 aa24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 SCN3AQ9NY46 2000 aa24.39■■□□□ 1.5
SDCCAG3-201ENST00000298537 STK25O00506 426 aa24.39■■□□□ 1.49
SDCCAG3-201ENST00000298537 EI24O14681 340 aa24.39■■□□□ 1.49
SDCCAG3-201ENST00000298537 CLOCKO15516 846 aa24.39■■□□□ 1.49
SDCCAG3-201ENST00000298537 ZNF682O95780 498 aa24.39■■□□□ 1.49
SDCCAG3-201ENST00000298537 RETP07949 1114 aa24.39■■□□□ 1.49
SDCCAG3-201ENST00000298537 SOAT1P35610 550 aa24.39■■□□□ 1.49
SDCCAG3-201ENST00000298537 TJAP1Q5JTD0 557 aa24.39■■□□□ 1.49
SDCCAG3-201ENST00000298537 FBXO42Q6P3S6 717 aa24.39■■□□□ 1.49
SDCCAG3-201ENST00000298537 GSDMCQ9BYG8 508 aa24.39■■□□□ 1.49
SDCCAG3-201ENST00000298537 TAS2R9Q9NYW1 312 aa24.39■■□□□ 1.49
SDCCAG3-201ENST00000298537 MYOCOSA0A1B0GUC4 107 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 ZNF217O75362 1048 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 CTSEP14091 401 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 UBE2IP63279 158 aaKnown RBP24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 ADPRMQ3LIE5 342 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 ABHD17CQ6PCB6 329 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 VTCN1Q7Z7D3 282 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 MFSD9Q8NBP5 474 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 MTERF3Q96E29 417 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 ACTR10Q9NZ32 417 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 WNT16Q9UBV4 365 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 RAB26Q9ULW5 256 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 SNX8Q9Y5X2 465 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 A0A1W2PS29 197 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 DENRO43583 198 aaKnown RBP24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 CERS1P27544 350 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 ANKRD34AQ69YU3 496 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 FCRL6Q6DN72 434 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 RNF130Q86XS8 419 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 HS3ST5Q8IZT8 346 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 UGT2B28Q9BY64 529 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 VCXQ9H320 206 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 MRPS17Q9Y2R5 130 aaKnown RBP24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 DMDP11532 3685 aa24.38■■□□□ 1.49
SDCCAG3-201ENST00000298537 B4DGG1 531 aa24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 KDM1AO60341 852 aa24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 GCM2O75603 506 aaPredicted RBP24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 DCNP07585 359 aaKnown RBP24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 FCGR1AP12314 374 aa24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 ZNF23P17027 643 aa24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 JUNDP17535 347 aa24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 RPS26P62854 115 aaKnown RBP24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 ZP2Q05996 745 aa24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 UGT2A3Q6UWM9 527 aa24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 PARGQ86W56 976 aa24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 FAM46DQ8NEK8 389 aa24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 MIR1-1HGQ9H1L0 117 aa24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 TBC1D17Q9HA65 648 aa24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 DLGAP2Q9P1A6 1054 aa24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 SNX7Q9UNH6 387 aa24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 ATG4BQ9Y4P1 393 aa24.37■■□□□ 1.49
SDCCAG3-201ENST00000298537 A0A0J9YVX5 310 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 RNF103-CHMP3A0A140T963 221 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 EME2A4GXA9 379 aaPredicted RBP24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 ZW10O43264 779 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 B4GALT2O60909 372 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 NELFEP18615 380 aaKnown RBP24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 AHRP35869 848 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 RPL3P39023 403 aaKnown RBP24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 HSPB3Q12988 150 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 SLAMF1Q13291 335 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 ZNF750Q32MQ0 723 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 NDUFAF5Q5TEU4 345 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 SPRED1Q7Z699 444 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 ACOT4Q8N9L9 421 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 TTLQ8NG68 377 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 OR52E4Q8NGH9 312 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 TMBIM1Q969X1 311 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 NR1H4Q96RI1 486 aaPredicted RBP24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 SARGQ9BW04 601 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 SOX17Q9H6I2 414 aaPredicted RBP24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 FBXW2Q9UKT8 454 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 METTL12A8MUP2 240 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 P2RX6O15547 441 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 NDUFS2O75306 463 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 FAM58BPP0C7Q3 252 aa24.36■■□□□ 1.49
SDCCAG3-201ENST00000298537 KDELR2P33947 212 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms