RNA–Protein interactions for RNA: ENST00000298428.13

SEC61A2-201, Transcript of Sec61 translocon alpha 2 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61A2, Length 1,893 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2-201ENST00000298428 DMDP11532 3685 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 WDFY4Q6ZS81 3184 aa17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 ARID1BQ8NFD5 2236 aaPredicted RBP17.59■□□□□ 0.41
SEC61A2-201ENST00000298428 RNASET2O00584 256 aaKnown RBP17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 ZSCAN9O15535 394 aaPredicted RBP17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 SIGLEC6O43699 453 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 GSNP06396 782 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 SYPP08247 313 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 EFNA1P20827 205 aaPredicted RBP17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 TRPC1P48995 793 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 ALDH9A1P49189 494 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 VSX2P58304 361 aaPredicted RBP17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 MTPNP58546 118 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 BTN3A2P78410 334 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 SUZ12Q15022 739 aaKnown RBP17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 NR0B2Q15466 257 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 MUM1Q2TAK8 710 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 ZC3H12BQ5HYM0 836 aaKnown RBP17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 CSNK1A1LQ8N752 337 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 ASB9Q96DX5 294 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 CCDC115Q96NT0 180 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 GBP5Q96PP8 586 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 KLHL3Q9UH77 587 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 BTNL2Q9UIR0 455 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 CROCCQ5TZA2 2017 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 PCDH15Q96QU1 1955 aa17.58■□□□□ 0.41
SEC61A2-201ENST00000298428 KMT2EQ8IZD2 1858 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 TRBV5-3A0A0A0MS03 114 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 B4GAT1O43505 415 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 HCRTR1O43613 425 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 SCELO95171 688 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 PTPN6P29350 595 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 ERFP50548 548 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 HNRNPFP52597 415 aaKnown RBP17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 LRRC74AQ0VAA2 488 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 SELPLGQ14242 412 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 FLOT2Q14254 428 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 TRIM25Q14258 630 aaKnown RBP17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 SPATS1Q496A3 300 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 MANEAQ5SRI9 462 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 MRM1Q6IN84 353 aaKnown RBP17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 ABHD13Q7L211 337 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 OR6C4Q8NGE1 309 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 STMN2Q93045 179 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 CCDC74AQ96AQ1 378 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 GTPBP2Q9BX10 602 aaKnown RBP17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 NLNQ9BYT8 704 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 ROGDIQ9GZN7 287 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 ALG2Q9H553 416 aa17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 GMPR2Q9P2T1 348 aaKnown RBP17.58■□□□□ 0.4
SEC61A2-201ENST00000298428 GUCY1B2O75343 617 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 CPSF4O95639 269 aaKnown RBP17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 SMIM10L1P0DMW3 83 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 HSD17B1P14061 328 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 HOXB9P17482 250 aaPredicted RBP17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 DDX5P17844 614 aaKnown RBP17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 MPLP40238 635 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 EEFSECP57772 596 aaKnown RBP17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 MS4A2Q01362 244 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 LIPEQ05469 1076 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 CCDC6Q16204 474 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 RUNDC3AQ59EK9 446 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 NDUFAF5Q5TEU4 345 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 PLXDC1Q8IUK5 500 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 MCATQ8IVS2 390 aaKnown RBP17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 DNAJC22Q8N4W6 341 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 CIDECQ96AQ7 238 aaPredicted RBP17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 SMIM10Q96HG1 83 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 SH3GL1Q99961 368 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 FAIM2Q9BWQ8 316 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 PCDHAC1Q9H158 963 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 SOHLH2Q9NX45 425 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 ASB4Q9Y574 426 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 MYO15AQ9UKN7 3530 aa17.57■□□□□ 0.4
SEC61A2-201ENST00000298428 IGHV5-51A0A0C4DH38 117 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 NVLO15381 856 aaKnown RBP17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 TBX19O60806 448 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 EPN2O95208 641 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 PNLIPP16233 465 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 MLLT3P42568 568 aaPredicted RBP17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 SNRPNP63162 240 aaKnown RBP17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 CCNIQ14094 377 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 PRSS53Q2L4Q9 553 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 MPEG1Q2M385 716 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 DEFB134Q4QY38 66 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 TMEM214Q6NUQ4 689 aaKnown RBP17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 SPRED1Q7Z699 444 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 EID2Q8N6I1 236 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 FAM181AQ8N9Y4 354 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 FAM47BQ8NA70 645 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 HIPK4Q8NE63 616 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 JADE3Q92613 823 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 LOXL4Q96JB6 756 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 THUMPD3Q9BV44 507 aaKnown RBP17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 ARRDC1-AS1Q9H2J1 176 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 SMOC1Q9H4F8 434 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 LYARQ9NX58 379 aaKnown RBP17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 FBXW2Q9UKT8 454 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 LY6G6EA0A0G2JKS1 128 aa17.56■□□□□ 0.4
SEC61A2-201ENST00000298428 ACOT8O14734 319 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms