RNA–Protein interactions for RNA: ENST00000297423.8

SPIDR-201, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPIDR, Length 3,988 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-201ENST00000297423 ATXN1LP0C7T5 689 aaKnown RBP14.28□□□□□ -0.12
SPIDR-201ENST00000297423 ZNF7P17097 686 aaPredicted RBP14.28□□□□□ -0.12
SPIDR-201ENST00000297423 CSRP3P50461 194 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 KHDRBS1Q07666 443 aaKnown RBP eCLIP14.28□□□□□ -0.12
SPIDR-201ENST00000297423 HKDC1Q2TB90 917 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 LINC00299Q6ZSB3 139 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 IQCF1Q8N6M8 205 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 ATAD1Q8NBU5 361 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 LINC01599Q8WXQ3 324 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 CHURC1-FNTBB4DL54 471 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 PDPK1O15530 556 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 TLX2O43763 284 aaPredicted RBP14.28□□□□□ -0.12
SPIDR-201ENST00000297423 IGFBP1P08833 259 aaPredicted RBP14.28□□□□□ -0.12
SPIDR-201ENST00000297423 SLC16A1P53985 500 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 YIF1BQ5BJH7 314 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 MTFR2Q6P444 385 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 RASSF6Q6ZTQ3 369 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 APH1BQ8WW43 257 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 RNFT2Q96EX2 444 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 C8orf48Q96LL4 319 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 RIPOR3Q96MK2 946 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 KCNH6Q9H252 994 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 PCDHGB2Q9Y5G2 931 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 F5H5T6 163 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 PCDH17O14917 1159 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 GGT2P36268 569 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 RPIAP49247 311 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 RPS24P62847 133 aaKnown RBP14.28□□□□□ -0.12
SPIDR-201ENST00000297423 ATAT1Q5SQI0 421 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 CXorf57Q6NSI4 855 aaKnown RBP14.28□□□□□ -0.12
SPIDR-201ENST00000297423 LRRTM3Q86VH5 581 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 OR4A15Q8NGL6 344 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 MAGIXQ9H6Y5 334 aa14.28□□□□□ -0.12
SPIDR-201ENST00000297423 PRR23D1E9PI22 279 aaPredicted RBP14.27□□□□□ -0.12
SPIDR-201ENST00000297423 ENTPD6O75354 484 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 ANXA5P08758 320 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 PRR23D2P0DMB1 279 aaPredicted RBP14.27□□□□□ -0.12
SPIDR-201ENST00000297423 BMP1P13497 986 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 PBX3P40426 434 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 CSNK2BP67870 215 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 TIAL1Q01085 375 aaKnown RBP eCLIP14.27□□□□□ -0.12
SPIDR-201ENST00000297423 FAM171BQ6P995 826 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 CCDC190Q86UF4 302 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 LAPTM4BQ86VI4 370 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 SERPINA9Q86WD7 417 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 LSMEM1Q8N8F7 131 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 TRMT61AQ96FX7 289 aaKnown RBP14.27□□□□□ -0.12
SPIDR-201ENST00000297423 LINC00597Q9H2U6 94 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 RALGAPA2Q2PPJ7 1873 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 HRGP04196 525 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 RGRP47804 291 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 PARP15Q460N3 678 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 CDONQ4KMG0 1287 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 FUT10Q6P4F1 479 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 SLC39A5Q6ZMH5 540 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 USP45Q70EL2 814 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 LSM14AQ8ND56 463 aaKnown RBP14.27□□□□□ -0.12
SPIDR-201ENST00000297423 MDGA1Q8NFP4 955 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 NLGN4YQ8NFZ3 816 aaPredicted RBP14.27□□□□□ -0.12
SPIDR-201ENST00000297423 ST8SIA2Q92186 375 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 NARS2Q96I59 477 aaKnown RBP14.27□□□□□ -0.12
SPIDR-201ENST00000297423 CPPED1Q9BRF8 314 aaPredicted RBP14.27□□□□□ -0.12
SPIDR-201ENST00000297423 KCNE2Q9Y6J6 123 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 HSPE1-MOB4S4R3N1 261 aa14.27□□□□□ -0.12
SPIDR-201ENST00000297423 MROH6A6NGR9 719 aa14.27□□□□□ -0.13
SPIDR-201ENST00000297423 POM121CA8CG34 1229 aa14.27□□□□□ -0.13
SPIDR-201ENST00000297423 RHOQP17081 205 aa14.27□□□□□ -0.13
SPIDR-201ENST00000297423 CSTF2P33240 577 aaKnown RBP eCLIP14.27□□□□□ -0.131e-11■■■■□ 21.8
SPIDR-201ENST00000297423 PTGES3Q15185 160 aaKnown RBP14.27□□□□□ -0.13
SPIDR-201ENST00000297423 GPR68Q15743 365 aa14.27□□□□□ -0.13
SPIDR-201ENST00000297423 MS4A13Q5J8X5 152 aa14.27□□□□□ -0.13
SPIDR-201ENST00000297423 CEP76Q8TAP6 659 aa14.27□□□□□ -0.13
SPIDR-201ENST00000297423 ARRDC2Q8TBH0 407 aa14.27□□□□□ -0.13
SPIDR-201ENST00000297423 ZNF566Q969W8 418 aa14.27□□□□□ -0.13
SPIDR-201ENST00000297423 CRELD1Q96HD1 420 aa14.27□□□□□ -0.13
SPIDR-201ENST00000297423 RTP3Q9BQQ7 232 aa14.27□□□□□ -0.13
SPIDR-201ENST00000297423 FBXO44Q9H4M3 255 aa14.27□□□□□ -0.13
SPIDR-201ENST00000297423 TMEM184CQ9NVA4 438 aa14.27□□□□□ -0.13
SPIDR-201ENST00000297423 SLC22A14Q9Y267 594 aa14.27□□□□□ -0.13
SPIDR-201ENST00000297423 RP1L1Q8IWN7 2480 aaPredicted RBP14.27□□□□□ -0.13
SPIDR-201ENST00000297423 OR6C75A6NL08 312 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 ARHGEF15O94989 841 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 ETFAP13804 333 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 DSC1Q08554 894 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 NFKBIDQ8NI38 313 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 GATAD2BQ8WXI9 593 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 ZFP3Q96NJ6 502 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 CCDC115Q96NT0 180 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 QRFPRQ96P65 431 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 ACOXLQ9NUZ1 547 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 FKBP14Q9NWM8 211 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 GSTK1Q9Y2Q3 226 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 WNT9AO14904 365 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 MAPK1P28482 360 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 RPL34P49207 117 aaKnown RBP14.26□□□□□ -0.13
SPIDR-201ENST00000297423 SLC11A1P49279 550 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 LRRC73Q5JTD7 316 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 ATXN7L2Q5T6C5 722 aaPredicted RBP14.26□□□□□ -0.13
SPIDR-201ENST00000297423 NAGSQ8N159 534 aa14.26□□□□□ -0.13
SPIDR-201ENST00000297423 C11orf65Q8NCR3 313 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms