RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 MS4A6EQ96DS6 147 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 KLHL31Q9H511 634 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 PIF1Q9H611 641 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 TBCCD1Q9NVR7 557 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 SPASTQ9UBP0 616 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 RIMS3Q9UJD0 308 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 AP4S1Q9Y587 144 aa14.81□□□□□ -0.04
LSM6-201ENST00000296581 NUP214P35658 2090 aaPredicted RBP14.8□□□□□ -0.04
LSM6-201ENST00000296581 A0A0A6YYD5 115 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 TCRBV5S2A0A599 114 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 GSAPA4D1B5 854 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 FAM220BPB1ANY3 271 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 B4DGG1 531 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 CPSF4O95639 269 aaKnown RBP14.8□□□□□ -0.04
LSM6-201ENST00000296581 PORP16435 677 aaPredicted RBP14.8□□□□□ -0.04
LSM6-201ENST00000296581 GGT1P19440 569 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 MAGP20916 626 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 RELAQ04206 551 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 MPEG1Q2M385 716 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 CHCHD2P9Q5T1J5 151 aaPredicted RBP14.8□□□□□ -0.04
LSM6-201ENST00000296581 SPESP1Q6UW49 350 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 GPR155Q7Z3F1 870 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 AVL9Q8NBF6 648 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 TNIP2Q8NFZ5 429 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 GOT1L1Q8NHS2 421 aaPredicted RBP14.8□□□□□ -0.04
LSM6-201ENST00000296581 LMX1AQ8TE12 382 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 ZNF764Q96H86 408 aaPredicted RBP14.8□□□□□ -0.04
LSM6-201ENST00000296581 TEFMQ96QE5 360 aaKnown RBP14.8□□□□□ -0.04
LSM6-201ENST00000296581 SPAG17Q6Q759 2223 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 TMPRSS11DO60235 418 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 GPR37L1O60883 481 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 NCK1P16333 377 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 DDCP20711 480 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 ABHD18Q0P651 414 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 CLPPQ16740 277 aaPredicted RBP14.8□□□□□ -0.04
LSM6-201ENST00000296581 PRSS53Q2L4Q9 553 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 TJAP1Q5JTD0 557 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 WDR45BQ5MNZ6 344 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 FCRL6Q6DN72 434 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 GLYATQ6IB77 296 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 FBXO42Q6P3S6 717 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 ABHD17CQ6PCB6 329 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 VN1R4Q7Z5H5 301 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 TMEM126BQ8IUX1 230 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 SDR16C5Q8N3Y7 309 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 DTWD1Q8N5C7 304 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 OR2L5Q8NG80 312 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 SLC6A16Q9GZN6 736 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 RPF2Q9H7B2 306 aaKnown RBP14.8□□□□□ -0.04
LSM6-201ENST00000296581 CCM2LQ9NUG4 571 aaPredicted RBP14.8□□□□□ -0.04
LSM6-201ENST00000296581 ARMC1Q9NVT9 282 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 HRASLS2Q9NWW9 162 aa14.8□□□□□ -0.04
LSM6-201ENST00000296581 C1orf226A1L170 272 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 C4orf51C9J302 202 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 CLIC1O00299 241 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 PPM1DO15297 605 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 CDK4P11802 303 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 FASLGP48023 281 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 PLA2G16P53816 162 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 HNRNPKP61978 463 aaKnown RBP eCLIP14.79□□□□□ -0.04
LSM6-201ENST00000296581 TOR1AIP1Q5JTV8 583 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 FIGLAQ6QHK4 219 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 ZNF793Q6ZN11 406 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 ZNF621Q6ZSS3 439 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 NANOGNBQ7Z5D8 188 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 TICAM1Q8IUC6 712 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 LILRA2Q8N149 483 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 C10orf111Q8N326 155 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 NT5CQ8TCD5 201 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 CANT1Q8WVQ1 401 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 C17orf62Q9BQA9 187 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 EPB41L1Q9H4G0 881 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 UCK1Q9HA47 277 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 MIEF1Q9NQG6 463 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 PRDM7Q9NQW5 492 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 PILRAQ9UKJ1 303 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 CACNA1IQ9P0X4 2223 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 THADAQ6YHU6 1953 aa14.79□□□□□ -0.04
LSM6-201ENST00000296581 DHRS12A0PJE2 317 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 ELOVL7A1L3X0 281 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 OR5K3A6NET4 321 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 EVPLLA8MZ36 301 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 EPN2O95208 641 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 PDGFBP01127 241 aaPredicted RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 GPIP06744 558 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 GPX2P18283 190 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 EFNA1P20827 205 aaPredicted RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 SSR2P43308 183 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 TSFMP43897 325 aaKnown RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 SLC14A1Q13336 389 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 HEPACAMQ14CZ8 416 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 OOSP2Q86WS3 158 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 C17orf82Q86X59 251 aaPredicted RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 ADGRG5Q8IZF4 528 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 MMP21Q8N119 569 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 AMER3Q8N944 861 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 FAM47BQ8NA70 645 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 SRFBP1Q8NEF9 429 aaKnown RBP14.78□□□□□ -0.04
LSM6-201ENST00000296581 GAB3Q8WWW8 586 aa14.78□□□□□ -0.04
LSM6-201ENST00000296581 TM4SF19Q96DZ7 209 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms