RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 IQCMA0A1B0GVH7 501 aa12.95□□□□□ -0.34
HPS3-201ENST00000296051 LIPKQ5VXJ0 399 aa12.95□□□□□ -0.34
HPS3-201ENST00000296051 ZNF730Q6ZMV8 503 aa12.95□□□□□ -0.34
HPS3-201ENST00000296051 SPATC1Q76KD6 591 aa12.95□□□□□ -0.34
HPS3-201ENST00000296051 CLEC14AQ86T13 490 aa12.95□□□□□ -0.34
HPS3-201ENST00000296051 ELL3Q9HB65 397 aaPredicted RBP12.95□□□□□ -0.34
HPS3-201ENST00000296051 MKLN1Q9UL63 735 aa12.95□□□□□ -0.34
HPS3-201ENST00000296051 ZNF195O14628 629 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 ORC5O43913 435 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 REM1O75628 298 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 RCVRNP35243 200 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 SCARB2Q14108 478 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 LRRC26Q2I0M4 334 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 FAM180BQ6P0A1 224 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 TMEM156Q8N614 296 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 CHDHQ8NE62 594 aaPredicted RBP12.94□□□□□ -0.34
HPS3-201ENST00000296051 NFKBIDQ8NI38 313 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 RC3H2Q9HBD1 1191 aaKnown RBP12.94□□□□□ -0.34
HPS3-201ENST00000296051 RUVBL1Q9Y265 456 aaKnown RBP12.94□□□□□ -0.34
HPS3-201ENST00000296051 TRBC2A0A5B9 178 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 STC2O76061 302 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 ASMTP46597 345 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 APOFQ13790 326 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 HHIPL1Q96JK4 782 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 FRMD6Q96NE9 622 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 ZNF382Q96SR6 550 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 SLC35A5Q9BS91 424 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 TM9SF3Q9HD45 589 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 PNO1Q9NRX1 252 aaKnown RBP12.94□□□□□ -0.34
HPS3-201ENST00000296051 GJD2Q9UKL4 321 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 SDC3O75056 442 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 FCER2P06734 321 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 C7P10643 843 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 ELAVL3Q14576 367 aaKnown RBP12.94□□□□□ -0.34
HPS3-201ENST00000296051 TRIM71Q2Q1W2 868 aaKnown RBP12.94□□□□□ -0.34
HPS3-201ENST00000296051 BICRALQ6AI39 1079 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 TBPL2Q6SJ96 375 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 Q6ZPB1 254 aaPredicted RBP12.94□□□□□ -0.34
HPS3-201ENST00000296051 DCP2Q8IU60 420 aaKnown RBP12.94□□□□□ -0.34
HPS3-201ENST00000296051 ELMOD2Q8IZ81 293 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 PCDHB14Q9Y5E9 798 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 CORINQ9Y5Q5 1042 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 ISPDA4D126 451 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 STX16O14662 325 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 B3GALT2O43825 422 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 PCDH7O60245 1069 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 PAPSS2O95340 614 aaPredicted RBP12.94□□□□□ -0.34
HPS3-201ENST00000296051 ADH1BP00325 375 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 RLN1P04808 185 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 C8GP07360 202 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 GGT1P19440 569 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 MYL9P24844 172 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 HNRNPA0Q13151 305 aaKnown RBP12.94□□□□□ -0.34
HPS3-201ENST00000296051 TCEAL5Q5H9L2 206 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 CRB2Q5IJ48 1285 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 FAM171BQ6P995 826 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 CRTC1Q6UUV9 634 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 RASSF6Q6ZTQ3 369 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 RHEBL1Q8TAI7 183 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 TMED9Q9BVK6 235 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 PCBD2Q9H0N5 130 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 OR51E2Q9H255 320 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 SLC32A1Q9H598 525 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 TAC3Q9UHF0 121 aa12.94□□□□□ -0.34
HPS3-201ENST00000296051 UBFD1O14562 309 aaKnown RBP12.93□□□□□ -0.34
HPS3-201ENST00000296051 AP1G1O43747 822 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 SLITRK5O94991 958 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 SMIM11AP58511 58 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 HEPACAMQ14CZ8 416 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 C10orf62Q5T681 223 aaPredicted RBP12.93□□□□□ -0.34
HPS3-201ENST00000296051 SLC39A11Q8N1S5 342 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 MEIOBQ8N635 442 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 TSPEARQ8WU66 669 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 ZNF354BQ96LW1 612 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 GAL3ST1Q99999 423 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 OR51V1Q9H2C8 321 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 SIAEQ9HAT2 523 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 FZD3Q9NPG1 666 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 PCTPQ9UKL6 214 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 SMCHD1A6NHR9 2005 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 ARHGEF33A8MVX0 844 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 AQP9O43315 295 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 ASGR2P07307 311 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 FDXRP22570 491 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 CLECL1Q8IZS7 167 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 FGF13Q92913 245 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 RAB8BQ92930 207 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 RDH12Q96NR8 316 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 INPP5KQ9BT40 448 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 IL1RAPQ9NPH3 570 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 IL37Q9NZH6 218 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 EIF3KQ9UBQ5 218 aaKnown RBP12.93□□□□□ -0.34
HPS3-201ENST00000296051 ENPP5Q9UJA9 477 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 INTS6Q9UL03 887 aaKnown RBP12.93□□□□□ -0.34
HPS3-201ENST00000296051 MBLAC1A4D2B0 266 aaPredicted RBP12.93□□□□□ -0.34
HPS3-201ENST00000296051 TLR4O00206 839 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 POLR2CP19387 275 aaPredicted RBP12.93□□□□□ -0.34
HPS3-201ENST00000296051 XKP51811 444 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 SERINC3Q13530 473 aa12.93□□□□□ -0.34
HPS3-201ENST00000296051 DUOXA1Q1HG43 343 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms