RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 SYT16Q17RD7 645 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 VSTM1Q6UX27 236 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 PAMR1Q6UXH9 720 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 FAM156AQ8NDB6 213 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.02□□□□□ -0.49
SLX4-201ENST00000294008 SORCS1Q8WY21 1168 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 MSANTD3Q96H12 275 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 LACRTQ9GZZ8 138 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 ST14Q9Y5Y6 855 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 MT-CO2P00403 227 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 NUDT6P53370 316 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 RAB31Q13636 194 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 ZNF761Q86XN6 746 aaPredicted RBP12.02□□□□□ -0.49
SLX4-201ENST00000294008 KIAA0895Q8NCT3 520 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 PRR36Q9H6K5 1346 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 A8MV72 311 aaPredicted RBP12.02□□□□□ -0.49
SLX4-201ENST00000294008 MATN2O00339 956 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 CNTN5O94779 1100 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 CERS6Q6ZMG9 384 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 C3orf49Q96BT1 292 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 ZNF347Q96SE7 839 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 MAPKAP1Q9BPZ7 522 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 SLC2A8Q9NY64 477 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 SLC17A7Q9P2U7 560 aa12.02□□□□□ -0.49
SLX4-201ENST00000294008 MOGSQ13724 837 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 TSTQ16762 297 aaKnown RBP12.01□□□□□ -0.49
SLX4-201ENST00000294008 FAM180BQ6P0A1 224 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 ZNF454Q8N9F8 522 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 CLEC1AQ8NC01 280 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 OR2A12Q8NGT7 310 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 STT3BQ8TCJ2 826 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 ZNF431Q8TF32 576 aaPredicted RBP12.01□□□□□ -0.49
SLX4-201ENST00000294008 CREB3L1Q96BA8 519 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 RBM14Q96PK6 669 aaKnown RBP12.01□□□□□ -0.49
SLX4-201ENST00000294008 PEX10O60683 326 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 MAFO75444 373 aaPredicted RBP12.01□□□□□ -0.49
SLX4-201ENST00000294008 PRKD3O94806 890 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 TMEM225BP0DP42 221 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 CCL5P13501 91 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 TAS2R39P59534 338 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 MEF2AQ02078 507 aaPredicted RBP12.01□□□□□ -0.49
SLX4-201ENST00000294008 TAP2Q03519 686 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 AUHQ13825 339 aaKnown RBP12.01□□□□□ -0.49
SLX4-201ENST00000294008 CEACAM20Q6UY09 585 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 OR14A2Q96R54 314 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 CCM2Q9BSQ5 444 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 RBM24Q9BX46 236 aaKnown RBP12.01□□□□□ -0.49
SLX4-201ENST00000294008 OR14J1Q9UGF5 321 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 PEX16Q9Y5Y5 336 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 IMPA2O14732 288 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 BMP4P12644 408 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 JUNDP17535 347 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 SHMT1P34896 483 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 CAMLGP49069 296 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 TMEM201Q5SNT2 666 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 TMEM71Q6P5X7 295 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 TSACCQ96A04 125 aaPredicted RBP12.01□□□□□ -0.49
SLX4-201ENST00000294008 GPATCH2Q9NW75 528 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 NAALAD2Q9Y3Q0 740 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 TTLL8A6PVC2 850 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 SF3A2Q15428 464 aaKnown RBP12.01□□□□□ -0.49
SLX4-201ENST00000294008 PYROXD2Q8N2H3 581 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 LRIG1Q96JA1 1093 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 SYT4Q9H2B2 425 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 ENGP17813 658 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 KIAA1614Q5VZ46 1190 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 PPP1R35Q8TAP8 253 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 C16orf78Q8WTQ4 265 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 SLC44A1Q8WWI5 657 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 FCAMRQ8WWV6 532 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 TMEM234Q8WY98 164 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 PCDHAC2Q9Y5I4 1007 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 CAPN8A6NHC0 703 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 EEF1E1-BLOC1S5C9J1V9 151 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 EEF1E1O43324 174 aaKnown RBP12.01□□□□□ -0.49
SLX4-201ENST00000294008 AP1G1O43747 822 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 CDRT1O95170 752 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 HMGN1P05114 100 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 IDH3GP51553 393 aaPredicted RBP12.01□□□□□ -0.49
SLX4-201ENST00000294008 GBE1Q04446 702 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 KLF10Q13118 480 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 TPRG1Q6ZUI0 275 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 GPR155Q7Z3F1 870 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 REM2Q8IYK8 340 aaPredicted RBP12.01□□□□□ -0.49
SLX4-201ENST00000294008 CBR4Q8N4T8 237 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 CELF5Q8N6W0 485 aaKnown RBP12.01□□□□□ -0.49
SLX4-201ENST00000294008 TMCO6Q96DC7 493 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 FAM117AQ9C073 453 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 LRRN3Q9H3W5 708 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 RHOJQ9H4E5 214 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 TLR9Q9NR96 1032 aa12.01□□□□□ -0.49
SLX4-201ENST00000294008 ECI2O75521 394 aa12□□□□□ -0.49
SLX4-201ENST00000294008 OR8U9P0C7N5 309 aa12□□□□□ -0.49
SLX4-201ENST00000294008 NDUFV2P19404 249 aa12□□□□□ -0.49
SLX4-201ENST00000294008 RPL5P46777 297 aaKnown RBP12□□□□□ -0.49
SLX4-201ENST00000294008 PNLIPRP1P54315 467 aa12□□□□□ -0.49
SLX4-201ENST00000294008 AIF1P55008 147 aa12□□□□□ -0.49
SLX4-201ENST00000294008 LASP1Q14847 261 aaKnown RBP12□□□□□ -0.49
SLX4-201ENST00000294008 GRIN2CQ14957 1233 aa12□□□□□ -0.49
SLX4-201ENST00000294008 LRIT3Q3SXY7 679 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms