RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 IFI30P13284 250 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 CYBAP13498 195 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 PRKACGP22612 351 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF45Q02386 682 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 NPWQ8N729 165 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF548Q8NEK5 533 aaPredicted RBP12.31□□□□□ -0.44
PTCD1-201ENST00000292478 FKBP10Q96AY3 582 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 ARMC5Q96C12 935 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 C17orf62Q9BQA9 187 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 SLC30A2Q9BRI3 323 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF639Q9UID6 485 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 AHSA1O95433 338 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 PCBP2Q15366 365 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTCD1-201ENST00000292478 TMEM164Q5U3C3 297 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.31□□□□□ -0.44
PTCD1-201ENST00000292478 MALT1Q9UDY8 824 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 H7BY64 318 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 SLC19A2O60779 497 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 DIRAS1O95057 198 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 CDRT1O95170 752 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 FHP07954 510 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 HSD11B1P28845 292 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 ABRAXAS2Q15018 415 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 ELOCQ15369 112 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 NXPE4Q6UWF7 544 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF227Q86WZ6 799 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 CARM1Q86X55 608 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 OR4K1Q8NGD4 311 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 SCAMP4Q969E2 229 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 PRAP1Q96NZ9 151 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 TBC1D24Q9ULP9 559 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 A0A075B6Q4 140 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 GRXCR2A6NFK2 248 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 DLGAP1O14490 977 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 DHRS4L1P0CG22 281 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 SNTA1Q13424 505 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF598Q86UK7 904 aaKnown RBP12.31□□□□□ -0.44
PTCD1-201ENST00000292478 FAM129BQ96TA1 746 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 OR51I1Q9H343 314 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF696Q9H7X3 374 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 IL23AQ9NPF7 189 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 BRD7Q9NPI1 651 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 RGPD2P0DJD1 1756 aa12.31□□□□□ -0.44
PTCD1-201ENST00000292478 CCRL2O00421 344 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 CHP2O43745 196 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 RHCEP18577 417 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 KCNAB2Q13303 367 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 PTGR1Q14914 329 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 C6orf141Q5SZD1 244 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 OGFRL1Q5TC84 451 aaPredicted RBP12.3□□□□□ -0.44
PTCD1-201ENST00000292478 ANKRD26P1Q6NSI1 321 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 SUN3Q8TAQ9 357 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 SLC7A6OSQ96CW6 309 aaPredicted RBP12.3□□□□□ -0.44
PTCD1-201ENST00000292478 ZBED3Q96IU2 234 aaPredicted RBP12.3□□□□□ -0.44
PTCD1-201ENST00000292478 MARCH7Q9H992 704 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 GRHPRQ9UBQ7 328 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 MGAT4AQ9UM21 535 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 PMF1-BGLAPU3KQ54 211 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 AHDC1Q5TGY3 1603 aaPredicted RBP12.3□□□□□ -0.44
PTCD1-201ENST00000292478 TMEM189-UBE2V1I3L0A0 370 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 J3QLW9 94 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 GBAP04062 536 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 FGF4P08620 206 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 IL3P08700 152 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 HTR1AP08908 422 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF19P17023 458 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 RPS15AP62244 130 aaKnown RBP12.3□□□□□ -0.44
PTCD1-201ENST00000292478 OR4D1Q15615 310 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 HSDL2Q6YN16 418 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 OR4K17Q8NGC6 315 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 LMX1AQ8TE12 382 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 HS6ST2Q96MM7 605 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 PCTPQ9UKL6 214 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 CDH10Q9Y6N8 788 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 C2orf78A6NCI8 922 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 A8MUA0 341 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 ZNF208O43345 1280 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 KAT7O95251 611 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 KLK3P07288 261 aaPredicted RBP12.3□□□□□ -0.44
PTCD1-201ENST00000292478 C8orf89P0DMQ9 161 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 GADD45AP24522 165 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 SPINT3P49223 89 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 STK19P49842 368 aaPredicted RBP12.3□□□□□ -0.44
PTCD1-201ENST00000292478 TBPL1P62380 186 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 ADAM17P78536 824 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 CEACAM7Q14002 265 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 CLCA4Q14CN2 919 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 PGBD2Q6P3X8 592 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 ISCA2Q86U28 154 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 RASGRP3Q8IV61 690 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 FAM86B1Q8N7N1 296 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 TCEANCQ8N8B7 351 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 OR2L3Q8NG85 312 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 CEP76Q8TAP6 659 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 PHOSPHO1Q8TCT1 267 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 TMED9Q9BVK6 235 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 IGSF5Q9NSI5 407 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 TMLHEQ9NVH6 421 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 DKK3Q9UBP4 350 aa12.3□□□□□ -0.44
PTCD1-201ENST00000292478 UGDHO60701 494 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms