RNA–Protein interactions for RNA: ENST00000292476.9

CPSF4-201, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CPSF4, Length 1,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-201ENST00000292476 OR7G3Q8NG95 312 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 GPBAR1Q8TDU6 330 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 NUDT8Q8WV74 236 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 NCLNQ969V3 563 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 PYURFQ96I23 114 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 IL17FQ96PD4 163 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 MBOAT4Q96T53 435 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 AIF1LQ9BQI0 150 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 MENTQ9BUN1 341 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 SPATA9Q9BWV2 254 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 TMEM168Q9H0V1 697 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 PLGRKTQ9HBL7 147 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 PRM3Q9NNZ6 103 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 TBC1D29Q9UFV1 150 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 PPT2Q9UMR5 302 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 SAMD4AQ9UPU9 718 aaKnown RBP16.06■□□□□ 0.16
CPSF4-201ENST00000292476 PCDHB11Q9Y5F2 797 aa16.06■□□□□ 0.16
CPSF4-201ENST00000292476 CCDC163A0A0D9SF12 145 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 H3BMQ9 156 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 SEC14L2O76054 403 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 PCNAP12004 261 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 CTSEP14091 401 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 CD22P20273 847 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 CRHBPP24387 322 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 PIK3CBP42338 1070 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 RAD23AP54725 363 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 EMP3P54852 163 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 ABATP80404 500 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 PLIN5Q00G26 463 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 RPL6Q02878 288 aaKnown RBP16.05■□□□□ 0.16
CPSF4-201ENST00000292476 SLBPQ14493 270 aaKnown RBP eCLIP16.05■□□□□ 0.16
CPSF4-201ENST00000292476 TPRG1LQ5T0D9 272 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 OR52E1Q8NGJ3 308 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 SLC22A18Q96BI1 424 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 COG8Q96MW5 612 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 OCEL1Q9H607 264 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 NT5DC2Q9H857 520 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 FAM120CQ9NX05 1096 aaKnown RBP16.05■□□□□ 0.16
CPSF4-201ENST00000292476 OR6C2Q9NZP2 312 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 PLAGL1Q9UM63 463 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 CDC14AQ9UNH5 594 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 ORC6Q9Y5N6 252 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 GMEB1Q9Y692 573 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 KIR2DS5A0A0G2JLQ3 304 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 A0A0G2JNG1 304 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 OR52A4PA6NMU1 304 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 EVPLLA8MZ36 301 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 PROB1E7EW31 1015 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 KIR2DS3K7RE56 304 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 SLC16A6O15403 523 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 HRO43593 1189 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 ITGAMP11215 1152 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 CD38P28907 300 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 RYKP34925 604 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 DCTP40126 519 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 KIR3DL1P43629 444 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 CCR8P51685 355 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 NEK2P51955 445 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 KIR2DS5Q14953 304 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 PLCL1Q15111 1095 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 LPAL2Q16609 132 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 DUOXA1Q1HG43 343 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 GTDC1Q4AE62 458 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 DNAJC14Q6Y2X3 702 aaPredicted RBP16.05■□□□□ 0.16
CPSF4-201ENST00000292476 WDR5BQ86VZ2 330 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 SLC22A18ASQ8N1D0 253 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 ABHD11Q8NFV4 315 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 B4GALNT2Q8NHY0 566 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 FAM81AQ8TBF8 368 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 ZNF566Q969W8 418 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 SOX17Q9H6I2 414 aaPredicted RBP16.05■□□□□ 0.16
CPSF4-201ENST00000292476 TAC3Q9UHF0 121 aa16.05■□□□□ 0.16
CPSF4-201ENST00000292476 RUVBL1Q9Y265 456 aaKnown RBP16.05■□□□□ 0.16
CPSF4-201ENST00000292476 PIPSLA2A3N6 862 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 RFXANKO14593 260 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 SERPINA1P01009 418 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 AK4P27144 223 aaPredicted RBP16.04■□□□□ 0.16
CPSF4-201ENST00000292476 PRDX1Q06830 199 aaKnown RBP16.04■□□□□ 0.16
CPSF4-201ENST00000292476 FZD2Q14332 565 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 ZIK1Q3SY52 487 aaPredicted RBP16.04■□□□□ 0.16
CPSF4-201ENST00000292476 SPIN4Q56A73 249 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 CATSPEREQ5SY80 951 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 C6orf141Q5SZD1 244 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 NOXRED1Q6NXP6 359 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 DUS1LQ6P1R4 473 aaKnown RBP16.04■□□□□ 0.16
CPSF4-201ENST00000292476 SHQ1Q6PI26 577 aaKnown RBP16.04■□□□□ 0.16
CPSF4-201ENST00000292476 TMIGD1Q6UXZ0 262 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 ASCL5Q7RTU5 278 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 TRIM48Q8IWZ4 208 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 TBC1D19Q8N5T2 526 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 FAM160A2Q8N612 972 aaPredicted RBP16.04■□□□□ 0.16
CPSF4-201ENST00000292476 AVL9Q8NBF6 648 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 OR8J2Q8NGG1 315 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 CLHC1Q8NHS4 586 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 FBLIM1Q8WUP2 373 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 ORAI3Q9BRQ5 295 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 TBCDQ9BTW9 1192 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 NAALAD2Q9Y3Q0 740 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 HSPE1-MOB4S4R3N1 261 aa16.04■□□□□ 0.16
CPSF4-201ENST00000292476 CROCCQ5TZA2 2017 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 622 ms