RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SIM2Q14190 667 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-201ENST00000279247 AGERQ15109 404 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 HMGN2P46Q86SG4 172 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 SYNPOQ8N3V7 929 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 RLN3Q8WXF3 142 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 SYNPO2LQ9H987 977 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 LHX9Q9NQ69 397 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 ZNF639Q9UID6 485 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 FBXW2Q9UKT8 454 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 BTN3A3O00478 584 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 CAPN5O15484 640 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-201ENST00000279247 SUV39H1O43463 412 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 PABPC4LP0CB38 370 aaKnown RBP17.1■□□□□ 0.33
CAPN1-201ENST00000279247 CRYBA2P53672 197 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 REEP5Q00765 189 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 TP53BP2Q13625 1128 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 ZNF761Q86XN6 746 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-201ENST00000279247 DEFB119Q8N690 84 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 ZFP28Q8NHY6 868 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 TM4SF18Q96CE8 201 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 TEFMQ96QE5 360 aaKnown RBP17.1■□□□□ 0.33
CAPN1-201ENST00000279247 GAS2L1Q99501 681 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-201ENST00000279247 RIBC2Q9H4K1 309 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 PELI2Q9HAT8 420 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 SLC6A20Q9NP91 592 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 RPS6KA6Q9UK32 745 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 RAB23Q9ULC3 237 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 CYP8B1Q9UNU6 501 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 KIF1CO43896 1103 aaKnown RBP17.1■□□□□ 0.33
CAPN1-201ENST00000279247 PRSS23O95084 383 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 C8orf89P0DMQ9 161 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 PRKAG1P54619 331 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 APOFQ13790 326 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 ZNF750Q32MQ0 723 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 OR2T5Q6IEZ7 315 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 ERICH5Q6P6B1 374 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 TMEM26Q6ZUK4 368 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 OR2T29Q8NH02 315 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 SGCDQ92629 289 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 AMBRA1Q9C0C7 1298 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 PCBD2Q9H0N5 130 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 WASH6PQ9NQA3 447 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 PDP1Q9P0J1 537 aaPredicted RBP17.1■□□□□ 0.33
CAPN1-201ENST00000279247 SPATA7Q9P0W8 599 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 SH3GLB1Q9Y371 365 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 TESMINQ9Y4I5 508 aa17.1■□□□□ 0.33
CAPN1-201ENST00000279247 GPR89AB7ZAQ6 455 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 M0QX08 132 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 NME6O75414 186 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-201ENST00000279247 GPR89BP0CG08 455 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 DRD1P21728 446 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 PKLRP30613 574 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 GRK3P35626 688 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 HSD17B2P37059 387 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 SCARB2Q14108 478 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 LRIT3Q3SXY7 679 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 RPS26P11Q5JNZ5 115 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-201ENST00000279247 PATL1Q86TB9 770 aaKnown RBP17.09■□□□□ 0.33
CAPN1-201ENST00000279247 ARL10Q8N8L6 244 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 CXorf40BQ96DE9 158 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 OSBPL10Q9BXB5 764 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 PREBQ9HCU5 417 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 IL1RAPQ9NPH3 570 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 C2orf42Q9NWW7 574 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 GABRG2P18507 467 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 HTR1BP28222 390 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 PEBP1P30086 187 aaKnown RBP17.09■□□□□ 0.33
CAPN1-201ENST00000279247 MVDP53602 400 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 NR1H2P55055 460 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 LRRC74AQ0VAA2 488 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 GCNT6Q5T4J0 391 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 KIAA1614Q5VZ46 1190 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 OLIG3Q7RTU3 272 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 CAMKMTQ7Z624 323 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 UBE3DQ7Z6J8 389 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 NUDT13Q86X67 352 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 OR5K1Q8NHB7 308 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 RGMAQ96B86 450 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 AICDAQ9GZX7 198 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 C6orf106Q9H6K1 298 aaPredicted RBP17.09■□□□□ 0.33
CAPN1-201ENST00000279247 PRDM6Q9NQX0 595 aa17.09■□□□□ 0.33
CAPN1-201ENST00000279247 C4orf51C9J302 202 aa17.08■□□□□ 0.33
CAPN1-201ENST00000279247 PXNP49023 591 aaPredicted RBP17.08■□□□□ 0.33
CAPN1-201ENST00000279247 MAPK10P53779 464 aa17.08■□□□□ 0.33
CAPN1-201ENST00000279247 C21orf58P58505 322 aa17.08■□□□□ 0.33
CAPN1-201ENST00000279247 ADARB1P78563 741 aaKnown RBP17.08■□□□□ 0.33
CAPN1-201ENST00000279247 PIGFQ07326 219 aa17.08■□□□□ 0.33
CAPN1-201ENST00000279247 DMPKQ09013 629 aa17.08■□□□□ 0.33
CAPN1-201ENST00000279247 NEDD8Q15843 81 aa17.08■□□□□ 0.33
CAPN1-201ENST00000279247 MEP1AQ16819 746 aa17.08■□□□□ 0.33
CAPN1-201ENST00000279247 ZNF793Q6ZN11 406 aa17.08■□□□□ 0.33
CAPN1-201ENST00000279247 PAGE2Q7Z2X7 111 aa17.08■□□□□ 0.33
CAPN1-201ENST00000279247 FAM160A2Q8N612 972 aaPredicted RBP17.08■□□□□ 0.33
CAPN1-201ENST00000279247 OR2L3Q8NG85 312 aa17.08■□□□□ 0.33
CAPN1-201ENST00000279247 FAM3CQ92520 227 aa17.08■□□□□ 0.33
CAPN1-201ENST00000279247 TCEAL2Q9H3H9 227 aaPredicted RBP17.08■□□□□ 0.33
CAPN1-201ENST00000279247 UBE2ZQ9H832 354 aaPredicted RBP17.08■□□□□ 0.33
CAPN1-201ENST00000279247 LIN28AQ9H9Z2 209 aaKnown RBP17.08■□□□□ 0.33
CAPN1-201ENST00000279247 ADPRHL2Q9NX46 363 aa17.08■□□□□ 0.33
CAPN1-201ENST00000279247 GSAPA4D1B5 854 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms