RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 KDM1BQ8NB78 822 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 GPR26Q8NDV2 337 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 FAM3CQ92520 227 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 FOXJ1Q92949 421 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 MOAP1Q96BY2 351 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 GAL3ST1Q99999 423 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 METTL7AQ9H8H3 244 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 PRODH2Q9UF12 536 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 LAMTOR5O43504 91 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 JMJD7P0C870 316 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 RNH1P13489 461 aaKnown RBP10.84□□□□□ -0.67
USP6NL-201ENST00000277575 FUT4P22083 530 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 OXTRP30559 389 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 ERVPABLB-1P60509 514 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 HNRNPKP61978 463 aaKnown RBP eCLIP10.84□□□□□ -0.67
USP6NL-201ENST00000277575 POU6F2P78424 691 aaPredicted RBP10.84□□□□□ -0.67
USP6NL-201ENST00000277575 TRAM2Q15035 370 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 PON3Q15166 354 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 EMC10Q5UCC4 262 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 CSNK1A1LQ8N752 337 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 CD200R1Q8TD46 325 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 CNDP2Q96KP4 475 aaKnown RBP10.84□□□□□ -0.67
USP6NL-201ENST00000277575 ANKRA2Q9H9E1 313 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 PTTG2Q9NZH5 202 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 ING4Q9UNL4 249 aa10.84□□□□□ -0.67
USP6NL-201ENST00000277575 FEZF1A0PJY2 475 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 C1orf226A1L170 272 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 LILRB3O75022 631 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 TRIM3O75382 744 aaPredicted RBP10.83□□□□□ -0.68
USP6NL-201ENST00000277575 THEGLP0DJG4 465 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 OR12D1P0DN82 309 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 GP1BBP13224 206 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 CBX3Q13185 183 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 EGFLAMQ63HQ2 1017 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 PUM2Q8TB72 1066 aaKnown RBP eCLIP10.83□□□□□ -0.686e-7■■■□□ 18
USP6NL-201ENST00000277575 CAPSLQ8WWF8 208 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 PHF12Q96QT6 1004 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 CXCL16Q9H2A7 254 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 BRD7Q9NPI1 651 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 A0A075B6Q4 140 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 AKAP8O43823 692 aaKnown RBP10.83□□□□□ -0.68
USP6NL-201ENST00000277575 SNNO75324 88 aaPredicted RBP10.83□□□□□ -0.68
USP6NL-201ENST00000277575 ITGBL1O95965 494 aaPredicted RBP10.83□□□□□ -0.68
USP6NL-201ENST00000277575 PLGP00747 810 aaPredicted RBP10.83□□□□□ -0.68
USP6NL-201ENST00000277575 SERPINA3P01011 423 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 FHP07954 510 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 TACSTD2P09758 323 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 RPS3P23396 243 aaKnown RBP eCLIP10.83□□□□□ -0.68
USP6NL-201ENST00000277575 DUSP3P51452 185 aaPredicted RBP10.83□□□□□ -0.68
USP6NL-201ENST00000277575 CDH11P55287 796 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 MVKQ03426 396 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 GALNT1Q10472 559 aaPredicted RBP10.83□□□□□ -0.68
USP6NL-201ENST00000277575 CEACAM7Q14002 265 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 NDUFA5Q16718 116 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 SHKBP1Q8TBC3 707 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 ISG20Q96AZ6 181 aaKnown RBP10.83□□□□□ -0.68
USP6NL-201ENST00000277575 L3HYPDHQ96EM0 354 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 NARS2Q96I59 477 aaKnown RBP10.83□□□□□ -0.68
USP6NL-201ENST00000277575 ARNT2Q9HBZ2 717 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.83□□□□□ -0.68
USP6NL-201ENST00000277575 COMMD3Q9UBI1 195 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 PCDHGB1Q9Y5G3 927 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 SLX4Q8IY92 1834 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 CENPFP49454 3210 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 G3V2L1 256 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 BLOC1S5-TXNDC5H3BN57 136 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 HTR1EP28566 365 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 GRIN2CQ14957 1233 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 C18orf21Q32NC0 220 aaPredicted RBP10.83□□□□□ -0.68
USP6NL-201ENST00000277575 FLYWCH1Q4VC44 716 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 TMEM35AQ53FP2 167 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 ARL9Q6T311 187 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 CARM1Q86X55 608 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 GPR150Q8NGU9 434 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 PTERQ96BW5 349 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 SLC45A3Q96JT2 553 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 ZFP3Q96NJ6 502 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 C1QTNF1Q9BXJ1 281 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 TOR3AQ9H497 397 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 ING3Q9NXR8 418 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 STOX2Q9P2F5 926 aaPredicted RBP10.83□□□□□ -0.68
USP6NL-201ENST00000277575 LIPT1Q9Y234 373 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 FAM25EA8MYX2 175 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 DUX1O43812 170 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 KCNJ13O60928 360 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 HNRNPA2B1P22626 353 aaKnown RBP10.83□□□□□ -0.68
USP6NL-201ENST00000277575 GABRA3P34903 492 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 RGRP47804 291 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 CYP27C1Q4G0S4 372 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 MANEALQ5VSG8 457 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 KIAA1614Q5VZ46 1190 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 DNM1P34Q6PK57 102 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 MINDY1Q8N5J2 469 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 NUP43Q8NFH3 380 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 MDGA1Q8NFP4 955 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 OR8K5Q8NH50 307 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 TMEM203Q969S6 136 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 SLC39A13Q96H72 371 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 DSN1Q9H410 356 aa10.83□□□□□ -0.68
USP6NL-201ENST00000277575 SEC61A2Q9H9S3 476 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms